RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 CNGA1P29973 690 aa16.15■□□□□ 0.18
DENND3-213ENST00000520571 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
DENND3-213ENST00000520571 SART3Q15020 963 aaKnown RBP16.15■□□□□ 0.18
DENND3-213ENST00000520571 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
DENND3-213ENST00000520571 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
DENND3-213ENST00000520571 CPVLQ9H3G5 476 aa16.15■□□□□ 0.18
DENND3-213ENST00000520571 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
DENND3-213ENST00000520571 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
DENND3-213ENST00000520571 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
DENND3-213ENST00000520571 MAP3K21Q5TCX8 1036 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 SHISA4Q96DD7 197 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 UBA5Q9GZZ9 404 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 FBXO40Q9UH90 709 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 ZNF536O15090 1300 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
DENND3-213ENST00000520571 ZNF236Q9UL36 1845 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
DENND3-213ENST00000520571 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 WTAPQ15007 396 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 SEC23AQ15436 765 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 GPATCH4Q5T3I0 446 aaKnown RBP16.13■□□□□ 0.17
DENND3-213ENST00000520571 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 OLFML2BQ68BL8 750 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 MAML3Q96JK9 1138 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
DENND3-213ENST00000520571 ACAD9Q9H845 621 aa16.13■□□□□ 0.17
DENND3-213ENST00000520571 ICAM1P05362 532 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 NECTIN1Q15223 517 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 ASPRV1Q53RT3 343 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
DENND3-213ENST00000520571 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
DENND3-213ENST00000520571 PRC1O43663 620 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
DENND3-213ENST00000520571 MCM5P33992 734 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 ANTXR2P58335 489 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 ZNF792Q3KQV3 632 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
DENND3-213ENST00000520571 MUM1L1Q5H9M0 696 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 NSMFQ6X4W1 530 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 TINF2Q9BSI4 451 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
DENND3-213ENST00000520571 A1CFQ9NQ94 594 aaKnown RBP16.1■□□□□ 0.17
DENND3-213ENST00000520571 GPHNQ9NQX3 736 aaPredicted RBP16.1■□□□□ 0.17
DENND3-213ENST00000520571 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
DENND3-213ENST00000520571 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 CDC37Q16543 378 aaPredicted RBP16.09■□□□□ 0.17
DENND3-213ENST00000520571 USH1GQ495M9 461 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 STAG2Q8N3U4 1231 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
DENND3-213ENST00000520571 DDX20Q9UHI6 824 aaKnown RBP16.09■□□□□ 0.17
DENND3-213ENST00000520571 BAZ2BQ9UIF8 2168 aaKnown RBP16.09■□□□□ 0.17
DENND3-213ENST00000520571 MYH6P13533 1939 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
DENND3-213ENST00000520571 CYBAP13498 195 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.16
DENND3-213ENST00000520571 LHX8Q68G74 356 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
DENND3-213ENST00000520571 LY9Q9HBG7 655 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 CNPY2Q9Y2B0 182 aa16.08■□□□□ 0.16
DENND3-213ENST00000520571 MCM3APO60318 1980 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 NFIBO00712 420 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 REC8O95072 547 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 IGHA2P01877 340 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 GRM4Q14833 912 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
DENND3-213ENST00000520571 DIS3LQ8TF46 1054 aaKnown RBP16.07■□□□□ 0.16
DENND3-213ENST00000520571 DPF3Q92784 378 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 MYL10Q9BUA6 226 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 CYP39A1Q9NYL5 469 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 PFASO15067 1338 aa16.07■□□□□ 0.16
DENND3-213ENST00000520571 CEP290O15078 2479 aa16.06■□□□□ 0.16
DENND3-213ENST00000520571 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
DENND3-213ENST00000520571 CCDC69A6NI79 296 aa16.06■□□□□ 0.16
DENND3-213ENST00000520571 SH2B2O14492 632 aaPredicted RBP16.06■□□□□ 0.16
DENND3-213ENST00000520571 SEPT4O43236 478 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms