RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
IGHV3-62-201ENST00000520057 REC8O95072 547 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 SNHG28P0DPA3 235 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 CYP2C19P33261 490 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 NECTIN1Q15223 517 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 OLFML2BQ68BL8 750 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 NFXL1Q6ZNB6 911 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 STOX1Q6ZVD7 989 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 CATIPQ7Z7H3 387 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 RANBP17Q9H2T7 1088 aaKnown RBP19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 PAK6Q9NQU5 681 aaPredicted RBP19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 TAF6LQ9Y6J9 622 aa19.27■□□□□ 0.68
IGHV3-62-201ENST00000520057 ICAM1P05362 532 aa19.26■□□□□ 0.67
IGHV3-62-201ENST00000520057 MAML3Q96JK9 1138 aa19.26■□□□□ 0.67
IGHV3-62-201ENST00000520057 UBA5Q9GZZ9 404 aa19.26■□□□□ 0.67
IGHV3-62-201ENST00000520057 FLRT1Q9NZU1 646 aa19.26■□□□□ 0.67
IGHV3-62-201ENST00000520057 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
IGHV3-62-201ENST00000520057 PRC1O43663 620 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 KRT32Q14532 448 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 SEC23AQ15436 765 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 MAP3K21Q5TCX8 1036 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 MB21D2Q8IYB1 491 aaPredicted RBP19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 VAT1LQ9HCJ6 419 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 ZNF536O15090 1300 aa19.25■□□□□ 0.67
IGHV3-62-201ENST00000520057 LAMA4Q16363 1823 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 CCDC69A6NI79 296 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 POTEB2H3BUK9 544 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 CCND3P30281 292 aaPredicted RBP19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 ZNF792Q3KQV3 632 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 NSMFQ6X4W1 530 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 TMTC2Q8N394 836 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 TMEM87BQ96K49 555 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 CNPY2Q9Y2B0 182 aa19.24■□□□□ 0.67
IGHV3-62-201ENST00000520057 MSCO60682 206 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 FARP2O94887 1054 aaPredicted RBP19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 FGD1P98174 961 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 TINF2Q9BSI4 451 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 MTA3Q9BTC8 594 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 CPVLQ9H3G5 476 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 RLFQ13129 1914 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 PFASO15067 1338 aa19.23■□□□□ 0.67
IGHV3-62-201ENST00000520057 KLRF2D3W0D1 207 aa19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 CDC37Q16543 378 aaPredicted RBP19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 USH1GQ495M9 461 aa19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 ADGRF4Q8IZF3 695 aa19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 CTCFLQ8NI51 663 aaPredicted RBP19.22■□□□□ 0.67
IGHV3-62-201ENST00000520057 PTPDC1A2A3K4 754 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 KIF5BP33176 963 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 ANTXR2P58335 489 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 DOCK3Q8IZD9 2030 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 MSL3Q8N5Y2 521 aaKnown RBP19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 IGDCC4Q8TDY8 1250 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 SHISA4Q96DD7 197 aa19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 A1CFQ9NQ94 594 aaKnown RBP19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 DDX20Q9UHI6 824 aaKnown RBP19.21■□□□□ 0.67
IGHV3-62-201ENST00000520057 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 HMGB1P09429 215 aaKnown RBP19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 MUM1L1Q5H9M0 696 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 PRAMEF19Q5SWL8 479 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 ANKLE1Q8NAG6 615 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 HTATIP2Q9BUP3 242 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 CRISPLD2Q9H0B8 497 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 NRBP1Q9UHY1 535 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 SLC12A7Q9Y666 1083 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 WDR19Q8NEZ3 1342 aa19.2■□□□□ 0.66
IGHV3-62-201ENST00000520057 DNAJC25-GNG10A0A024R161 153 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 SEPT4O43236 478 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 DDAH1O94760 285 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 CYBAP13498 195 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 GRM4Q14833 912 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 NECAB2Q7Z6G3 386 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 FBXO11Q86XK2 927 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 ZNF654Q8IZM8 581 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 MPHOSPH6Q99547 160 aaKnown RBP19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 LRRC2Q9BYS8 371 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 LY9Q9HBG7 655 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 MAD2L2Q9UI95 211 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 ZHX1Q9UKY1 873 aaPredicted RBP19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 SYNGAP1Q96PV0 1343 aa19.19■□□□□ 0.66
IGHV3-62-201ENST00000520057 PALM3A6NDB9 673 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 ASB14A6NK59 587 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 SH2B2O14492 632 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 CALM1P0DP23 149 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 CALM2P0DP24 149 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 CALM3P0DP25 149 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 TAL1P17542 331 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 CALML3P27482 149 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 TRAF1Q13077 416 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 RNF207Q6ZRF8 634 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 DHX32Q7L7V1 743 aaKnown RBP19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
IGHV3-62-201ENST00000520057 DPF3Q92784 378 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms