RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 ZNF536O15090 1300 aa22.7■■□□□ 1.22
LMNA-225ENST00000515824 RBBP6Q7Z6E9 1792 aaKnown RBP22.7■■□□□ 1.22
LMNA-225ENST00000515824 SLC27A2O14975 620 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 PGK2P07205 417 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 CYP2C19P33261 490 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 SNAP25P60880 206 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 SEC23AQ15436 765 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 RNF20Q5VTR2 975 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 CREB3L3Q68CJ9 461 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 ANKRD35Q8N283 1001 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 SHISA4Q96DD7 197 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 MAML3Q96JK9 1138 aa22.69■■□□□ 1.22
LMNA-225ENST00000515824 GOLGA8HP0CJ92 632 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 ZNF792Q3KQV3 632 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 ASPRV1Q53RT3 343 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.68■■□□□ 1.22
LMNA-225ENST00000515824 TRERF1Q96PN7 1200 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 CRISPLD2Q9H0B8 497 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 ACAD9Q9H845 621 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 HOMER2Q9NSB8 354 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 PNMA2Q9UL42 364 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 CCPG1Q9ULG6 757 aa22.68■■□□□ 1.22
LMNA-225ENST00000515824 ZNF236Q9UL36 1845 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 IGHA2P01877 340 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 ICAM1P05362 532 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 PARP1P09874 1014 aaKnown RBP22.67■■□□□ 1.22
LMNA-225ENST00000515824 ALAS1P13196 640 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 CCND3P30281 292 aaPredicted RBP22.67■■□□□ 1.22
LMNA-225ENST00000515824 CHST3Q7LGC8 479 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 RNF146Q9NTX7 359 aa22.67■■□□□ 1.22
LMNA-225ENST00000515824 WTAPQ15007 396 aa22.66■■□□□ 1.22
LMNA-225ENST00000515824 TMEM67Q5HYA8 995 aa22.66■■□□□ 1.22
LMNA-225ENST00000515824 MB21D2Q8IYB1 491 aaPredicted RBP22.66■■□□□ 1.22
LMNA-225ENST00000515824 UBA5Q9GZZ9 404 aa22.66■■□□□ 1.22
LMNA-225ENST00000515824 DNAJC25-GNG10A0A024R161 153 aa22.65■■□□□ 1.22
LMNA-225ENST00000515824 CNGA1P29973 690 aa22.65■■□□□ 1.22
LMNA-225ENST00000515824 TINF2Q9BSI4 451 aa22.65■■□□□ 1.22
LMNA-225ENST00000515824 MSCO60682 206 aa22.64■■□□□ 1.21
LMNA-225ENST00000515824 MCM5P33992 734 aa22.64■■□□□ 1.21
LMNA-225ENST00000515824 MSL3Q8N5Y2 521 aaKnown RBP22.64■■□□□ 1.21
LMNA-225ENST00000515824 IGDCC4Q8TDY8 1250 aa22.64■■□□□ 1.21
LMNA-225ENST00000515824 MTA3Q9BTC8 594 aa22.64■■□□□ 1.21
LMNA-225ENST00000515824 FARP2O94887 1054 aaPredicted RBP22.63■■□□□ 1.21
LMNA-225ENST00000515824 CYBAP13498 195 aa22.63■■□□□ 1.21
LMNA-225ENST00000515824 ANTXR2P58335 489 aa22.63■■□□□ 1.21
LMNA-225ENST00000515824 ANKLE1Q8NAG6 615 aa22.63■■□□□ 1.21
LMNA-225ENST00000515824 OGDHLQ9ULD0 1010 aa22.63■■□□□ 1.21
LMNA-225ENST00000515824 MKI67P46013 3256 aaKnown RBP22.63■■□□□ 1.21
LMNA-225ENST00000515824 POTEB2H3BUK9 544 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 PRC1O43663 620 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 DHX16O60231 1041 aaKnown RBP22.62■■□□□ 1.21
LMNA-225ENST00000515824 CATIPQ7Z7H3 387 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 ZNF467Q7Z7K2 595 aaPredicted RBP22.62■■□□□ 1.21
LMNA-225ENST00000515824 ADGRF4Q8IZF3 695 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 TMTC2Q8N394 836 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 TMEM87BQ96K49 555 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 CPVLQ9H3G5 476 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 A1CFQ9NQ94 594 aaKnown RBP22.62■■□□□ 1.21
LMNA-225ENST00000515824 DDX20Q9UHI6 824 aaKnown RBP22.62■■□□□ 1.21
LMNA-225ENST00000515824 NRBP1Q9UHY1 535 aa22.62■■□□□ 1.21
LMNA-225ENST00000515824 ZNFX1Q9P2E3 1918 aaKnown RBP22.62■■□□□ 1.21
LMNA-225ENST00000515824 PFASO15067 1338 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 WDR19Q8NEZ3 1342 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 MUM1L1Q5H9M0 696 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 PRAMEF19Q5SWL8 479 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 LHX8Q68G74 356 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 TRPV1Q8NER1 839 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 VAT1LQ9HCJ6 419 aa22.61■■□□□ 1.21
LMNA-225ENST00000515824 KLRF2D3W0D1 207 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 SEPT4O43236 478 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 REC8O95072 547 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 TSGA10IPQ3SY00 556 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 MAMDC4Q6UXC1 1216 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 UBE2Q1Q7Z7E8 422 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 STAG2Q8N3U4 1231 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 NEK1Q96PY6 1258 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 MAD2L2Q9UI95 211 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 CNPY2Q9Y2B0 182 aa22.6■■□□□ 1.21
LMNA-225ENST00000515824 SYNGAP1Q96PV0 1343 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 PALM3A6NDB9 673 aaPredicted RBP22.59■■□□□ 1.21
LMNA-225ENST00000515824 TROAPQ12815 778 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 KRT32Q14532 448 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 GRM4Q14833 912 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 CDC37Q16543 378 aaPredicted RBP22.59■■□□□ 1.21
LMNA-225ENST00000515824 NSMFQ6X4W1 530 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 NECAB2Q7Z6G3 386 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 FAM133AQ8N9E0 248 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 LY9Q9HBG7 655 aa22.59■■□□□ 1.21
LMNA-225ENST00000515824 CCDC69A6NI79 296 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 TAL1P17542 331 aaPredicted RBP22.58■■□□□ 1.21
LMNA-225ENST00000515824 CNTN2Q02246 1040 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 NFXL1Q6ZNB6 911 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 NUP133Q8WUM0 1156 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 PAWRQ96IZ0 340 aaKnown RBP22.58■■□□□ 1.21
LMNA-225ENST00000515824 HTATIP2Q9BUP3 242 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 JMJD4Q9H9V9 463 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 CYP39A1Q9NYL5 469 aa22.58■■□□□ 1.21
LMNA-225ENST00000515824 SH2B2O14492 632 aaPredicted RBP22.57■■□□□ 1.2
LMNA-225ENST00000515824 USH1GQ495M9 461 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms