RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 KSR1Q8IVT5 923 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 LCORLQ8N3X6 602 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 TAB3Q8N5C8 712 aaPredicted RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
TRIO-222ENST00000515144 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 KIAA1024Q9UPX6 916 aa15.92■□□□□ 0.14
TRIO-222ENST00000515144 FANCBQ8NB91 859 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 PRR36Q9H6K5 1346 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 TSTA3Q13630 321 aaPredicted RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 CLIC6Q96NY7 704 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 NUB1Q9Y5A7 615 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 SEMA3EO15041 775 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 SKA2Q8WVK7 121 aaPredicted RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 STK24Q9Y6E0 443 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 LAMC1P11047 1609 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 CACNB1Q02641 598 aaPredicted RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 MTERF2Q49AM1 385 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 CRKP46108 304 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 TYW1BQ6NUM6 668 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 ARMCX5Q6P1M9 558 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 CGNQ9P2M7 1197 aaKnown RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 ATP10DQ9P241 1426 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 SCG2P13521 617 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 MIS18BP1Q6P0N0 1132 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 SYT10Q6XYQ8 523 aa15.91■□□□□ 0.14
TRIO-222ENST00000515144 PRPF38AQ8NAV1 312 aaKnown RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 FAM49AQ9H0Q0 323 aaPredicted RBP15.91■□□□□ 0.14
TRIO-222ENST00000515144 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 FAM160A1Q05DH4 1040 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 TLR3O15455 904 aaKnown RBP15.9■□□□□ 0.14
TRIO-222ENST00000515144 NEK8Q86SG6 692 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 SERTAD1Q9UHV2 236 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 ABCC3O15438 1527 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 GADD45BO75293 160 aaPredicted RBP15.9■□□□□ 0.14
TRIO-222ENST00000515144 BMP3P12645 472 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 DDX12PQ92771 950 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 CTTNBP2NLQ9P2B4 639 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 CAVIN2O95810 425 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 GH2P01242 217 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 TMEM191BP0C7N4 346 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 ITIH3Q06033 890 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 SNX21Q969T3 373 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
TRIO-222ENST00000515144 HGSO14964 777 aaPredicted RBP15.9■□□□□ 0.14
TRIO-222ENST00000515144 USP14P54578 494 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 KRT26Q7Z3Y9 468 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 RSPH3Q86UC2 560 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 ZNF653Q96CK0 615 aa15.9■□□□□ 0.14
TRIO-222ENST00000515144 CALRP27797 417 aaKnown RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 MAN1A1P33908 653 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 PTGDRQ13258 359 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 ADAT2Q7Z6V5 191 aaKnown RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 SYDE2Q5VT97 1194 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 ADD3Q9UEY8 706 aaKnown RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 SLU7O95391 586 aaKnown RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 CCDC89Q8N998 374 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 ZNF668Q96K58 619 aaPredicted RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 PCIF1Q9H4Z3 704 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 COL15A1P39059 1388 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 EIF2AK2P19525 551 aaKnown RBP15.89■□□□□ 0.13
TRIO-222ENST00000515144 UVSSAQ2YD98 709 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 CCDC77Q9BR77 488 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 ADCY9O60503 1353 aa15.89■□□□□ 0.13
TRIO-222ENST00000515144 NFX1Q12986 1120 aaKnown RBP15.88■□□□□ 0.13
TRIO-222ENST00000515144 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 NRBP2Q9NSY0 501 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRIO-222ENST00000515144 RABGAP1Q9Y3P9 1069 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 XRCC6P12956 609 aaKnown RBP eCLIP15.88■□□□□ 0.13
TRIO-222ENST00000515144 GTF2F1P35269 517 aaKnown RBP eCLIP15.88■□□□□ 0.133e-6■■■■□ 22.4
TRIO-222ENST00000515144 PPM1KQ8N3J5 372 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 UBL4BQ8N7F7 174 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 GJA10Q969M2 543 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 NT5C3AQ9H0P0 336 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 SLITRK6Q9H5Y7 841 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 AFG3L2Q9Y4W6 797 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 RETREG2Q8NC44 543 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 XRCC5P13010 732 aaKnown RBP15.88■□□□□ 0.13
TRIO-222ENST00000515144 SPECC1LQ69YQ0 1117 aa15.88■□□□□ 0.13
TRIO-222ENST00000515144 ZNF589Q86UQ0 364 aaPredicted RBP15.88■□□□□ 0.13
TRIO-222ENST00000515144 PUS7LQ9H0K6 701 aaKnown RBP15.88■□□□□ 0.13
TRIO-222ENST00000515144 AMNQ9BXJ7 453 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 SAT1P21673 171 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 STIM2Q9P246 746 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 ALKQ9UM73 1620 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 MAGI2Q86UL8 1455 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 OR52Z1P0C646 297 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 PRAMEF18Q5VWM3 479 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 SPON1Q9HCB6 807 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 UTP11Q9Y3A2 253 aaKnown RBP15.87■□□□□ 0.13
TRIO-222ENST00000515144 CNGA4Q8IV77 575 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 TRIM7Q9C029 511 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
TRIO-222ENST00000515144 BTBD18B2RXH4 712 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 ATRIPQ8WXE1 791 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 INTS4Q96HW7 963 aaKnown RBP15.87■□□□□ 0.13
TRIO-222ENST00000515144 E9PCH4 1651 aa15.87■□□□□ 0.13
TRIO-222ENST00000515144 CALCOCO2Q13137 446 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms