RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
DDX41-212ENST00000511040 FDX1P10109 184 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 ALAS1P13196 640 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 CCND3P30281 292 aaPredicted RBP16.36■□□□□ 0.21
DDX41-212ENST00000511040 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 MAP3K21Q5TCX8 1036 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 MFSD14CQ5VZR4 134 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 U2AF1L4Q8WU68 220 aaKnown RBP16.36■□□□□ 0.21
DDX41-212ENST00000511040 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
DDX41-212ENST00000511040 HMX1Q9NP08 348 aaPredicted RBP16.36■□□□□ 0.21
DDX41-212ENST00000511040 RNF146Q9NTX7 359 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 CCPG1Q9ULG6 757 aa16.36■□□□□ 0.21
DDX41-212ENST00000511040 ERICH2A1L162 156 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
DDX41-212ENST00000511040 GJA8P48165 433 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 WTAPQ15007 396 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 PAK6Q9NQU5 681 aaPredicted RBP16.35■□□□□ 0.21
DDX41-212ENST00000511040 SLC5A4Q9NY91 659 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
DDX41-212ENST00000511040 PRC1O43663 620 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 SGPL1O95470 568 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 TFRCP02786 760 aaKnown RBP16.34■□□□□ 0.21
DDX41-212ENST00000511040 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
DDX41-212ENST00000511040 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 GPATCH4Q5T3I0 446 aaKnown RBP16.34■□□□□ 0.21
DDX41-212ENST00000511040 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 RASEFQ8IZ41 740 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 TRPV1Q8NER1 839 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 MAML3Q96JK9 1138 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 LRRC2Q9BYS8 371 aa16.34■□□□□ 0.21
DDX41-212ENST00000511040 SMCHD1A6NHR9 2005 aa16.33■□□□□ 0.21
DDX41-212ENST00000511040 DHX16O60231 1041 aaKnown RBP16.33■□□□□ 0.2
DDX41-212ENST00000511040 ICAM1P05362 532 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 ACAD9Q9H845 621 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 VAT1LQ9HCJ6 419 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
DDX41-212ENST00000511040 IGHA2P01877 340 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 CNGA1P29973 690 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 MCM5P33992 734 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 ADGRF4Q8IZF3 695 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 PLXNA1Q9UIW2 1896 aa16.32■□□□□ 0.2
DDX41-212ENST00000511040 BRCA2P51587 3418 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
DDX41-212ENST00000511040 CNTN2Q02246 1040 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 GRM4Q14833 912 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 CDC37Q16543 378 aaPredicted RBP16.31■□□□□ 0.2
DDX41-212ENST00000511040 ADCK5Q3MIX3 580 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 USH1GQ495M9 461 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 A1CFQ9NQ94 594 aaKnown RBP16.31■□□□□ 0.2
DDX41-212ENST00000511040 MAD2L2Q9UI95 211 aa16.31■□□□□ 0.2
DDX41-212ENST00000511040 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 NFIBO00712 420 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 FARP2O94887 1054 aaPredicted RBP16.3■□□□□ 0.2
DDX41-212ENST00000511040 REC8O95072 547 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 CYBAP13498 195 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.3■□□□□ 0.2
DDX41-212ENST00000511040 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 FGD4Q96M96 766 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 PURBQ96QR8 312 aaKnown RBP16.3■□□□□ 0.2
DDX41-212ENST00000511040 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
DDX41-212ENST00000511040 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
DDX41-212ENST00000511040 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
DDX41-212ENST00000511040 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 TROAPQ12815 778 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 SLC35G1Q2M3R5 365 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
DDX41-212ENST00000511040 CLEC4DQ8WXI8 215 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 TMEM87BQ96K49 555 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
DDX41-212ENST00000511040 DDX49Q9Y6V7 483 aaKnown RBP16.29■□□□□ 0.2
DDX41-212ENST00000511040 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 CPA1P15085 419 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 RXRAP19793 462 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 HSPA4P34932 840 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 TSGA10IPQ3SY00 556 aa16.28■□□□□ 0.2
DDX41-212ENST00000511040 LHX8Q68G74 356 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms