RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 PNMA1Q8ND90 353 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 FBXO40Q9UH90 709 aa18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 FRMPD2Q68DX3 1309 aaPredicted RBP18.94■□□□□ 0.62
PDLIM5-212ENST00000509333 TRDNQ13061 729 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 NECTIN1Q15223 517 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 TKFCQ3LXA3 575 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 CCDC174Q6PII3 467 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 ANKLE1Q8NAG6 615 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 TINF2Q9BSI4 451 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 RANBP17Q9H2T7 1088 aaKnown RBP18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 KAT14Q9H8E8 782 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 TNKSO95271 1327 aa18.93■□□□□ 0.62
PDLIM5-212ENST00000509333 FARP2O94887 1054 aaPredicted RBP18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 GOLGA8HP0CJ92 632 aa18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 CYBAP13498 195 aa18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 NCOA7Q8NI08 942 aa18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 PAWRQ96IZ0 340 aaKnown RBP18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 UBAC1Q9BSL1 405 aa18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 UBA5Q9GZZ9 404 aa18.92■□□□□ 0.62
PDLIM5-212ENST00000509333 ICAM1P05362 532 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 ALAS1P13196 640 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 CNGA1P29973 690 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 MAMDC4Q6UXC1 1216 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 ANKRD35Q8N283 1001 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
PDLIM5-212ENST00000509333 SMCHD1A6NHR9 2005 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 IFIT1BQ5T764 474 aaKnown RBP18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 ZNF467Q7Z7K2 595 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 MSL3Q8N5Y2 521 aaKnown RBP18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 IGDCC4Q8TDY8 1250 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 FGD4Q96M96 766 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 CPVLQ9H3G5 476 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 ACAD9Q9H845 621 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 HOMER2Q9NSB8 354 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 DDX20Q9UHI6 824 aaKnown RBP18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 NRBP1Q9UHY1 535 aa18.9■□□□□ 0.62
PDLIM5-212ENST00000509333 IFIT3O14879 490 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 SLC27A2O14975 620 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 ANTXR2P58335 489 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 CREB3L3Q68CJ9 461 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 CHST3Q7LGC8 479 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 NECAB2Q7Z6G3 386 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 DIS3LQ8TF46 1054 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 A1CFQ9NQ94 594 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 CCPG1Q9ULG6 757 aa18.89■□□□□ 0.61
PDLIM5-212ENST00000509333 SEPT4O43236 478 aa18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 MSCO60682 206 aa18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 CDC45O75419 566 aa18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 ZNF865P0CJ78 1059 aaPredicted RBP18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 CNTN2Q02246 1040 aa18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 ANO2Q9NQ90 1003 aa18.88■□□□□ 0.61
PDLIM5-212ENST00000509333 PALM3A6NDB9 673 aaPredicted RBP18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 SOWAHBA6NEL2 793 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 COL9A3Q14050 684 aaPredicted RBP18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 ASPRV1Q53RT3 343 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 RALYLQ86SE5 291 aaKnown RBP18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 ADGRF4Q8IZF3 695 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 CLEC4DQ8WXI8 215 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 DPF3Q92784 378 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 ZNF236Q9UL36 1845 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 PNMA2Q9UL42 364 aa18.87■□□□□ 0.61
PDLIM5-212ENST00000509333 POTEB2H3BUK9 544 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 COL6A1P12109 1028 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 PRPF38BQ5VTL8 546 aaKnown RBP18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 MTA3Q9BTC8 594 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 HTATIP2Q9BUP3 242 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 JMJD4Q9H9V9 463 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 VAT1LQ9HCJ6 419 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 CYP39A1Q9NYL5 469 aa18.86■□□□□ 0.61
PDLIM5-212ENST00000509333 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 TROAPQ12815 778 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 WTAPQ15007 396 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 TSGA10IPQ3SY00 556 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 ANO1Q5XXA6 986 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 CASC1Q6TDU7 716 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 MAD2L2Q9UI95 211 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 CEP290O15078 2479 aa18.85■□□□□ 0.61
PDLIM5-212ENST00000509333 WDR19Q8NEZ3 1342 aa18.84■□□□□ 0.61
PDLIM5-212ENST00000509333 ERICH2A1L162 156 aa18.84■□□□□ 0.61
PDLIM5-212ENST00000509333 KLRF2D3W0D1 207 aa18.84■□□□□ 0.61
PDLIM5-212ENST00000509333 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
PDLIM5-212ENST00000509333 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
PDLIM5-212ENST00000509333 ARRDC4Q8NCT1 418 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms