RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 RANBP17Q9H2T7 1088 aaKnown RBP19.84■□□□□ 0.77
CLDND1-219ENST00000508659 ACAD9Q9H845 621 aa19.84■□□□□ 0.77
CLDND1-219ENST00000508659 RNF146Q9NTX7 359 aa19.84■□□□□ 0.77
CLDND1-219ENST00000508659 CCPG1Q9ULG6 757 aa19.84■□□□□ 0.77
CLDND1-219ENST00000508659 IFIT3O14879 490 aaKnown RBP19.83■□□□□ 0.77
CLDND1-219ENST00000508659 SGPL1O95470 568 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 ICAM1P05362 532 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 GOLGA8HP0CJ92 632 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 ALAS1P13196 640 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 CYP2C19P33261 490 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 TKFCQ3LXA3 575 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 CREB3L3Q68CJ9 461 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 ANKRD35Q8N283 1001 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 DDX11Q96FC9 970 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 AGBL1Q96MI9 1066 aa19.83■□□□□ 0.77
CLDND1-219ENST00000508659 KIAA0100Q14667 2235 aaKnown RBP19.82■□□□□ 0.76
CLDND1-219ENST00000508659 TFRCP02786 760 aaKnown RBP19.82■□□□□ 0.76
CLDND1-219ENST00000508659 PARP1P09874 1014 aaKnown RBP19.82■□□□□ 0.76
CLDND1-219ENST00000508659 WTAPQ15007 396 aa19.82■□□□□ 0.76
CLDND1-219ENST00000508659 SEC23AQ15436 765 aa19.82■□□□□ 0.76
CLDND1-219ENST00000508659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.82■□□□□ 0.76
CLDND1-219ENST00000508659 MB21D2Q8IYB1 491 aaPredicted RBP19.82■□□□□ 0.76
CLDND1-219ENST00000508659 FARP2O94887 1054 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-219ENST00000508659 CAPN2P17655 700 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 CCND3P30281 292 aaPredicted RBP19.81■□□□□ 0.76
CLDND1-219ENST00000508659 NECTIN1Q15223 517 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 TMEM67Q5HYA8 995 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 CHST3Q7LGC8 479 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 TRERF1Q96PN7 1200 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 PNMA2Q9UL42 364 aa19.81■□□□□ 0.76
CLDND1-219ENST00000508659 DIS3Q9Y2L1 958 aaKnown RBP19.81■□□□□ 0.76
CLDND1-219ENST00000508659 DHX16O60231 1041 aaKnown RBP19.8■□□□□ 0.76
CLDND1-219ENST00000508659 CYBAP13498 195 aa19.8■□□□□ 0.76
CLDND1-219ENST00000508659 ANTXR2P58335 489 aa19.8■□□□□ 0.76
CLDND1-219ENST00000508659 ZNF792Q3KQV3 632 aa19.8■□□□□ 0.76
CLDND1-219ENST00000508659 CRISPLD2Q9H0B8 497 aa19.8■□□□□ 0.76
CLDND1-219ENST00000508659 PFASO15067 1338 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 PRC1O43663 620 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 IGHA2P01877 340 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 CNGA1P29973 690 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 MCM5P33992 734 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 UBA5Q9GZZ9 404 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
CLDND1-219ENST00000508659 WDR19Q8NEZ3 1342 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 DNAJC25-GNG10A0A024R161 153 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 MSCO60682 206 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 REC8O95072 547 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 TAL1P17542 331 aaPredicted RBP19.78■□□□□ 0.76
CLDND1-219ENST00000508659 CDC37Q16543 378 aaPredicted RBP19.78■□□□□ 0.76
CLDND1-219ENST00000508659 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 TINF2Q9BSI4 451 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 MTA3Q9BTC8 594 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 A1CFQ9NQ94 594 aaKnown RBP19.78■□□□□ 0.76
CLDND1-219ENST00000508659 DDX20Q9UHI6 824 aaKnown RBP19.78■□□□□ 0.76
CLDND1-219ENST00000508659 CNPY2Q9Y2B0 182 aa19.78■□□□□ 0.76
CLDND1-219ENST00000508659 POTEB2H3BUK9 544 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 MUM1L1Q5H9M0 696 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 NSMFQ6X4W1 530 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 MSL3Q8N5Y2 521 aaKnown RBP19.77■□□□□ 0.76
CLDND1-219ENST00000508659 ANKLE1Q8NAG6 615 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 TMEM87BQ96K49 555 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 NRBP1Q9UHY1 535 aa19.77■□□□□ 0.76
CLDND1-219ENST00000508659 MKI67P46013 3256 aaKnown RBP19.77■□□□□ 0.76
CLDND1-219ENST00000508659 SYNGAP1Q96PV0 1343 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 KRT32Q14532 448 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 ZNF467Q7Z7K2 595 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-219ENST00000508659 ADGRF4Q8IZF3 695 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 TRPV1Q8NER1 839 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 LY9Q9HBG7 655 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 SENP2Q9HC62 589 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 OGDHLQ9ULD0 1010 aa19.76■□□□□ 0.75
CLDND1-219ENST00000508659 SH2B2O14492 632 aaPredicted RBP19.75■□□□□ 0.75
CLDND1-219ENST00000508659 SEPT4O43236 478 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 GRM4Q14833 912 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 USH1GQ495M9 461 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 STAG2Q8N3U4 1231 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 IGDCC4Q8TDY8 1250 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 MAD2L2Q9UI95 211 aa19.75■□□□□ 0.75
CLDND1-219ENST00000508659 CCDC69A6NI79 296 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 KLRF2D3W0D1 207 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 NFIBO00712 420 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 DDAH1O94760 285 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 CNTN2Q02246 1040 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 TROAPQ12815 778 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 LHX8Q68G74 356 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 MAMDC4Q6UXC1 1216 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 UBE2Q1Q7Z7E8 422 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 FAM133AQ8N9E0 248 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 NEK1Q96PY6 1258 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 HTATIP2Q9BUP3 242 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 CYP39A1Q9NYL5 469 aa19.74■□□□□ 0.75
CLDND1-219ENST00000508659 ZHX1Q9UKY1 873 aaPredicted RBP19.74■□□□□ 0.75
CLDND1-219ENST00000508659 PLXNA1Q9UIW2 1896 aa19.73■□□□□ 0.75
CLDND1-219ENST00000508659 PTPDC1A2A3K4 754 aa19.73■□□□□ 0.75
CLDND1-219ENST00000508659 PALM3A6NDB9 673 aaPredicted RBP19.73■□□□□ 0.75
CLDND1-219ENST00000508659 QRICH1Q2TAL8 776 aa19.73■□□□□ 0.75
CLDND1-219ENST00000508659 PRAMEF19Q5SWL8 479 aa19.73■□□□□ 0.75
CLDND1-219ENST00000508659 NECAB2Q7Z6G3 386 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms