RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 PAK6Q9NQU5 681 aaPredicted RBP20.89■□□□□ 0.94
SMN1-204ENST00000506163 HOMER2Q9NSB8 354 aa20.89■□□□□ 0.94
SMN1-204ENST00000506163 CTDP1Q9Y5B0 961 aaPredicted RBP20.89■□□□□ 0.94
SMN1-204ENST00000506163 GJB1P08034 283 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 COPB2P35606 906 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 SLC35G1Q2M3R5 365 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 TSGA10IPQ3SY00 556 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMN1-204ENST00000506163 KCNB2Q92953 911 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 LY9Q9HBG7 655 aa20.88■□□□□ 0.93
SMN1-204ENST00000506163 PRC1O43663 620 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 PRKAR2AP13861 404 aaKnown RBP20.87■□□□□ 0.93
SMN1-204ENST00000506163 CYP2C19P33261 490 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 KCTD2Q14681 263 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 ZNF792Q3KQV3 632 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 TMEM67Q5HYA8 995 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 GPATCH4Q5T3I0 446 aaKnown RBP20.87■□□□□ 0.93
SMN1-204ENST00000506163 TRMT44Q8IYL2 757 aaKnown RBP20.87■□□□□ 0.93
SMN1-204ENST00000506163 DNAJC25-GNG10A0A024R161 153 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 ICAM1P05362 532 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 CCND3P30281 292 aaPredicted RBP20.87■□□□□ 0.93
SMN1-204ENST00000506163 TROAPQ12815 778 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 WTAPQ15007 396 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 MUM1L1Q5H9M0 696 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 TRPV1Q8NER1 839 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 CHST13Q8NET6 341 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 MAML3Q96JK9 1138 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 LRRC2Q9BYS8 371 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 MAD2L2Q9UI95 211 aa20.87■□□□□ 0.93
SMN1-204ENST00000506163 RPTORQ8N122 1335 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 PALM3A6NDB9 673 aaPredicted RBP20.86■□□□□ 0.93
SMN1-204ENST00000506163 PARP1P09874 1014 aaKnown RBP20.86■□□□□ 0.93
SMN1-204ENST00000506163 ALAS1P13196 640 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 MCM5P33992 734 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 HSPA4P34932 840 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 GJA8P48165 433 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 OLFML2BQ68BL8 750 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 FGD4Q96M96 766 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 DEFB118Q96PH6 123 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 TRERF1Q96PN7 1200 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMN1-204ENST00000506163 RNF146Q9NTX7 359 aa20.86■□□□□ 0.93
SMN1-204ENST00000506163 SH2B2O14492 632 aaPredicted RBP20.85■□□□□ 0.93
SMN1-204ENST00000506163 EXOSC10Q01780 885 aaKnown RBP20.85■□□□□ 0.93
SMN1-204ENST00000506163 RNF20Q5VTR2 975 aa20.85■□□□□ 0.93
SMN1-204ENST00000506163 ADGRF4Q8IZF3 695 aa20.85■□□□□ 0.93
SMN1-204ENST00000506163 U2AF1L4Q8WU68 220 aaKnown RBP20.85■□□□□ 0.93
SMN1-204ENST00000506163 HMX1Q9NP08 348 aaPredicted RBP20.85■□□□□ 0.93
SMN1-204ENST00000506163 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
SMN1-204ENST00000506163 TNRC18O15417 2968 aaPredicted RBP20.84■□□□□ 0.93
SMN1-204ENST00000506163 ERICH2A1L162 156 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 SGPL1O95470 568 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 GRM4Q14833 912 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 SART3Q15020 963 aaKnown RBP20.84■□□□□ 0.93
SMN1-204ENST00000506163 PRAMEF19Q5SWL8 479 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 TCEANC2Q96MN5 208 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 NEK1Q96PY6 1258 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 MTA3Q9BTC8 594 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 ACAD9Q9H845 621 aa20.84■□□□□ 0.93
SMN1-204ENST00000506163 A1CFQ9NQ94 594 aaKnown RBP20.84■□□□□ 0.93
SMN1-204ENST00000506163 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.93
SMN1-204ENST00000506163 KLRF2D3W0D1 207 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 CNTN2Q02246 1040 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 TKFCQ3LXA3 575 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 MFSD14CQ5VZR4 134 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 DDX11Q96FC9 970 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 MYL10Q9BUA6 226 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 CRISPLD2Q9H0B8 497 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 VAT1LQ9HCJ6 419 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 FBXO40Q9UH90 709 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 DIS3Q9Y2L1 958 aaKnown RBP20.83■□□□□ 0.93
SMN1-204ENST00000506163 SNX14Q9Y5W7 946 aa20.83■□□□□ 0.93
SMN1-204ENST00000506163 PLXNA1Q9UIW2 1896 aa20.83■□□□□ 0.92
SMN1-204ENST00000506163 REC8O95072 547 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 CPA1P15085 419 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 MLLT1Q03111 559 aaPredicted RBP20.82■□□□□ 0.92
SMN1-204ENST00000506163 ANKRD35Q8N283 1001 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 CLEC4DQ8WXI8 215 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 TMEM87BQ96K49 555 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 SLC5A4Q9NY91 659 aa20.82■□□□□ 0.92
SMN1-204ENST00000506163 NFIBO00712 420 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 CYTH3O43739 400 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 CYBAP13498 195 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 CDC37Q16543 378 aaPredicted RBP20.81■□□□□ 0.92
SMN1-204ENST00000506163 LHX8Q68G74 356 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 ZNF654Q8IZM8 581 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 FAM133AQ8N9E0 248 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 MTMR8Q96EF0 704 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 PURBQ96QR8 312 aaKnown RBP20.81■□□□□ 0.92
SMN1-204ENST00000506163 ASTN1O14525 1302 aa20.81■□□□□ 0.92
SMN1-204ENST00000506163 LIFRP42702 1097 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 QRICH1Q2TAL8 776 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 DHX32Q7L7V1 743 aaKnown RBP20.8■□□□□ 0.92
SMN1-204ENST00000506163 UBE2Q1Q7Z7E8 422 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 CATIPQ7Z7H3 387 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 TINF2Q9BSI4 451 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 CYP39A1Q9NYL5 469 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms