RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 SRGAP2O75044 1071 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 MYL1P05976 194 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 CAVIN4Q5BKX8 364 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 DTHD1Q6ZMT9 781 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 C10orf67Q8IYJ2 551 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 JAKMIP2Q96AA8 810 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 TRIM34Q9BYJ4 488 aa27.45■■□□□ 1.99
DDX41-202ENST00000503078 TRIM66O15016 1216 aa27.45■■□□□ 1.98
DDX41-202ENST00000503078 SRGNP10124 158 aa27.45■■□□□ 1.98
DDX41-202ENST00000503078 KIF5BP33176 963 aa27.45■■□□□ 1.98
DDX41-202ENST00000503078 CYLC1P35663 651 aaPredicted RBP27.45■■□□□ 1.98
DDX41-202ENST00000503078 SEMA3FQ13275 785 aa27.45■■□□□ 1.98
DDX41-202ENST00000503078 RASSF8Q8NHQ8 419 aa27.45■■□□□ 1.98
DDX41-202ENST00000503078 NOC3LQ8WTT2 800 aaKnown RBP27.45■■□□□ 1.98
DDX41-202ENST00000503078 MKRN1Q9UHC7 482 aaKnown RBP27.45■■□□□ 1.98
DDX41-202ENST00000503078 WTIPA6NIX2 430 aaPredicted RBP27.44■■□□□ 1.98
DDX41-202ENST00000503078 RNF40O75150 1001 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 RHOBTB3O94955 611 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 GIMAP8Q8ND71 665 aaPredicted RBP27.44■■□□□ 1.98
DDX41-202ENST00000503078 SH3GLB2Q9NR46 395 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 PCDHA4Q9UN74 947 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 SYF2O95926 243 aaKnown RBP27.44■■□□□ 1.98
DDX41-202ENST00000503078 TNNT3P45378 269 aaPredicted RBP27.44■■□□□ 1.98
DDX41-202ENST00000503078 TTI2Q6NXR4 508 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 NUP58Q9BVL2 599 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 TTYH3Q9C0H2 523 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 EXOC1Q9NV70 894 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 HPCAL4Q9UM19 191 aa27.44■■□□□ 1.98
DDX41-202ENST00000503078 GOLGA6L1Q8N7Z2 621 aa27.43■■□□□ 1.98
DDX41-202ENST00000503078 CAPZA3Q96KX2 299 aa27.43■■□□□ 1.98
DDX41-202ENST00000503078 ZNHIT6Q9NWK9 470 aaKnown RBP27.43■■□□□ 1.98
DDX41-202ENST00000503078 B4DLN1 442 aa27.43■■□□□ 1.98
DDX41-202ENST00000503078 DCP1AQ9NPI6 582 aaPredicted RBP27.43■■□□□ 1.98
DDX41-202ENST00000503078 KBTBD4Q9NVX7 518 aa27.43■■□□□ 1.98
DDX41-202ENST00000503078 PP2D1A8MPX8 630 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 CRKLP46109 303 aaKnown RBP27.42■■□□□ 1.98
DDX41-202ENST00000503078 CCDC170Q8IYT3 715 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 RETREG2Q8NC44 543 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 TUBGCP2Q9BSJ2 902 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 AGPAT5Q9NUQ2 364 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 EIF3CLB5ME19 914 aaKnown RBP27.42■■□□□ 1.98
DDX41-202ENST00000503078 UBA7P41226 1012 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 FOXR1Q6PIV2 292 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 LRRC31Q6UY01 552 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 ANKRD18AQ8IVF6 992 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 RASGRP4Q8TDF6 673 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 COG1Q8WTW3 980 aa27.42■■□□□ 1.98
DDX41-202ENST00000503078 GPKOWQ92917 476 aaPredicted RBP eCLIP27.42■■□□□ 1.98
DDX41-202ENST00000503078 NSUN4Q96CB9 384 aaKnown RBP27.42■■□□□ 1.98
DDX41-202ENST00000503078 DHTKD1Q96HY7 919 aaPredicted RBP27.42■■□□□ 1.98
DDX41-202ENST00000503078 EIF3CQ99613 913 aaKnown RBP27.42■■□□□ 1.98
DDX41-202ENST00000503078 ANO9A1A5B4 782 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 TSPY2A6NKD2 308 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 PRPF6O94906 941 aaKnown RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 IPO7O95373 1038 aaKnown RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 TRIM21P19474 475 aaKnown RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 RCSD1Q6JBY9 416 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 AFAP1L1Q8TED9 768 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 FAM84BQ96KN1 310 aaPredicted RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 CRNKL1Q9BZJ0 848 aaKnown RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 CCSER1Q9C0I3 900 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 LACRTQ9GZZ8 138 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 NHEJ1Q9H9Q4 299 aaPredicted RBP27.41■■□□□ 1.98
DDX41-202ENST00000503078 LAMB1P07942 1786 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 SCN7AQ01118 1682 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 CCDC194A0A1B0GVG4 234 aa27.41■■□□□ 1.98
DDX41-202ENST00000503078 RCCD1A6NED2 376 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 ZBED6P86452 979 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 CSGALNACT2Q8N6G5 542 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 DUSP9Q99956 384 aaKnown RBP27.4■■□□□ 1.98
DDX41-202ENST00000503078 TMEM60Q9H2L4 133 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 ZC3H4Q9UPT8 1303 aaKnown RBP27.4■■□□□ 1.98
DDX41-202ENST00000503078 RASSF10A6NK89 507 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 M0R2N6 131 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 ATP8A2Q9NTI2 1148 aa27.4■■□□□ 1.98
DDX41-202ENST00000503078 ARPP21Q9UBL0 812 aaPredicted RBP27.4■■□□□ 1.98
DDX41-202ENST00000503078 VGLL3A8MV65 326 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 CYP2D6P10635 497 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 TBC1D8BQ0IIM8 1120 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 CAGE1Q8TC20 777 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 PURBQ96QR8 312 aaKnown RBP27.39■■□□□ 1.98
DDX41-202ENST00000503078 PLIN2Q99541 437 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 KAT14Q9H8E8 782 aa27.39■■□□□ 1.98
DDX41-202ENST00000503078 MECOMQ03112 1051 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 BSDC1Q9NW68 430 aaPredicted RBP27.38■■□□□ 1.97
DDX41-202ENST00000503078 LTBP4Q8N2S1 1624 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 SBK1Q52WX2 424 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 CDCA7Q9BWT1 371 aaPredicted RBP27.38■■□□□ 1.97
DDX41-202ENST00000503078 PCDHA6Q9UN73 950 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 PCDHA8Q9Y5H6 950 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 DOT1LQ8TEK3 1739 aa27.38■■□□□ 1.97
DDX41-202ENST00000503078 KLK7P49862 253 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 TYW1BQ6NUM6 668 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 ZFP91Q96JP5 570 aaPredicted RBP27.37■■□□□ 1.97
DDX41-202ENST00000503078 SPATA31A1Q5TZJ5 1347 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 IDEP14735 1019 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 CCNE1P24864 410 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 ATP6V1AP38606 617 aa27.37■■□□□ 1.97
DDX41-202ENST00000503078 CCNI2Q6ZMN8 369 aaPredicted RBP27.37■■□□□ 1.97
DDX41-202ENST00000503078 P2RX5Q93086 422 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms