RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
MRPL55-234ENST00000497758 RNF146Q9NTX7 359 aa13.71□□□□□ -0.21
MRPL55-234ENST00000497758 PNMA2Q9UL42 364 aa13.71□□□□□ -0.21
MRPL55-234ENST00000497758 CCPG1Q9ULG6 757 aa13.71□□□□□ -0.21
MRPL55-234ENST00000497758 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
MRPL55-234ENST00000497758 BRCA2P51587 3418 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 COBLO75128 1261 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 ICAM1P05362 532 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 ANKRD35Q8N283 1001 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 TMTC2Q8N394 836 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
MRPL55-234ENST00000497758 HMX1Q9NP08 348 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-234ENST00000497758 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 ZNF536O15090 1300 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-234ENST00000497758 PGK2P07205 417 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
MRPL55-234ENST00000497758 HSPA4P34932 840 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 TRIM32Q13049 653 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 TRERF1Q96PN7 1200 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 LY9Q9HBG7 655 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 ZNF236Q9UL36 1845 aa13.69□□□□□ -0.22
MRPL55-234ENST00000497758 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 EPB41L2O43491 1005 aaKnown RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 DDAH1O94760 285 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 GJB1P08034 283 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 FGD1P98174 961 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 GRM4Q14833 912 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 CDC37Q16543 378 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 ZNF654Q8IZM8 581 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 DEFB118Q96PH6 123 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 GPHNQ9NQX3 736 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-234ENST00000497758 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
MRPL55-234ENST00000497758 PFASO15067 1338 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 KIF5BP33176 963 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 CYP2C19P33261 490 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 LIFRP42702 1097 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 TROAPQ12815 778 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 MAP3K21Q5TCX8 1036 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 SYNE3Q6ZMZ3 975 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 DIS3Q9Y2L1 958 aaKnown RBP13.67□□□□□ -0.22
MRPL55-234ENST00000497758 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 SLC12A7Q9Y666 1083 aa13.67□□□□□ -0.22
MRPL55-234ENST00000497758 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 CALM1P0DP23 149 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 CALM2P0DP24 149 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 CALM3P0DP25 149 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 TAL1P17542 331 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 PSMA5P28066 241 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 CNGA1P29973 690 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 GJA8P48165 433 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 RGS19P49795 217 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 MLLT1Q03111 559 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 ZNF792Q3KQV3 632 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 USH1GQ495M9 461 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 BLOC1S2Q6QNY1 142 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 U2AF1L4Q8WU68 220 aaKnown RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 KCNB2Q92953 911 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
MRPL55-234ENST00000497758 A1CFQ9NQ94 594 aaKnown RBP13.66□□□□□ -0.22
MRPL55-234ENST00000497758 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
MRPL55-234ENST00000497758 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-234ENST00000497758 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 FBXO11Q86XK2 927 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
MRPL55-234ENST00000497758 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms