RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 DIS3Q9Y2L1 958 aaKnown RBP18.73■□□□□ 0.59
CTDSP1-214ENST00000497677 TNKSO95271 1327 aa18.73■□□□□ 0.59
CTDSP1-214ENST00000497677 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 SYDE2Q5VT97 1194 aa18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 OGDHLQ9ULD0 1010 aa18.72■□□□□ 0.59
CTDSP1-214ENST00000497677 TNRC18O15417 2968 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 CYBAP13498 195 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 TRDNQ13061 729 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 FBXO40Q9UH90 709 aa18.71■□□□□ 0.59
CTDSP1-214ENST00000497677 CDC45O75419 566 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 GPATCH4Q5T3I0 446 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 FGD4Q96M96 766 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 LAMA4Q16363 1823 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 ZNF236Q9UL36 1845 aa18.7■□□□□ 0.58
CTDSP1-214ENST00000497677 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 FARP2O94887 1054 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 ICAM1P05362 532 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 ANTXR2P58335 489 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 TINF2Q9BSI4 451 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 SENP2Q9HC62 589 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 ANO2Q9NQ90 1003 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 RNF146Q9NTX7 359 aa18.69■□□□□ 0.58
CTDSP1-214ENST00000497677 COL11A1P12107 1806 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 MUM1L1Q5H9M0 696 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 CREB3L3Q68CJ9 461 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 UBA5Q9GZZ9 404 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 ACAD9Q9H845 621 aa18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-214ENST00000497677 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 ALAS1P13196 640 aa18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 A1CFQ9NQ94 594 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 CCPG1Q9ULG6 757 aa18.67■□□□□ 0.58
CTDSP1-214ENST00000497677 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 CNTN2Q02246 1040 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 ZNF467Q7Z7K2 595 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 STAG2Q8N3U4 1231 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 FAM133AQ8N9E0 248 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
CTDSP1-214ENST00000497677 SEPT4O43236 478 aa18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 MSCO60682 206 aa18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 ZNF865P0CJ78 1059 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 CNGA1P29973 690 aa18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 ADGRF4Q8IZF3 695 aa18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 CLEC4DQ8WXI8 215 aa18.65■□□□□ 0.58
CTDSP1-214ENST00000497677 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 SOWAHBA6NEL2 793 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 TROAPQ12815 778 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 CYP39A1Q9NYL5 469 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 MAD2L2Q9UI95 211 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 SYNGAP1Q96PV0 1343 aa18.64■□□□□ 0.57
CTDSP1-214ENST00000497677 POTEB2H3BUK9 544 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 NFIBO00712 420 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 COL6A1P12109 1028 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 WTAPQ15007 396 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 NECAB2Q7Z6G3 386 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 MTA3Q9BTC8 594 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 JMJD4Q9H9V9 463 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 LY9Q9HBG7 655 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 PNMA2Q9UL42 364 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 ASTN1O14525 1302 aa18.63■□□□□ 0.57
CTDSP1-214ENST00000497677 ERICH2A1L162 156 aa18.62■□□□□ 0.57
CTDSP1-214ENST00000497677 PRC1O43663 620 aa18.62■□□□□ 0.57
CTDSP1-214ENST00000497677 GRM4Q14833 912 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms