RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 RFXAPO00287 272 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 TLR3O15455 904 aaKnown RBP13.44□□□□□ -0.26
LRP8-211ENST00000496580 FGBP02675 491 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 PTGS1P23219 599 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 COPB2P35606 906 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 SLC4A3P48751 1232 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 CCL23P55773 120 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 GJA9P57773 515 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 BEX3Q00994 111 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
LRP8-211ENST00000496580 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
LRP8-211ENST00000496580 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
LRP8-211ENST00000496580 DDX11Q96FC9 970 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 C1QTNF1Q9BXJ1 281 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 EXOC6BQ9Y2D4 811 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 GREB1LQ9C091 1923 aaPredicted RBP13.44□□□□□ -0.26
LRP8-211ENST00000496580 LRRC37A2A6NM11 1700 aa13.44□□□□□ -0.26
LRP8-211ENST00000496580 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.43□□□□□ -0.26
LRP8-211ENST00000496580 GOLIM4O00461 696 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 MBD4O95243 580 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 CHGBP05060 677 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 SKIV2LQ15477 1246 aaKnown RBP13.43□□□□□ -0.26
LRP8-211ENST00000496580 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 PPP2R2DQ66LE6 453 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 VWCEQ96DN2 955 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 DNAJC2Q99543 621 aaKnown RBP13.43□□□□□ -0.26
LRP8-211ENST00000496580 TEX13BQ9BXU2 312 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 HIPK3Q9H422 1215 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
LRP8-211ENST00000496580 ASTN1O14525 1302 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 HMMRO75330 724 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 TTF1Q15361 905 aaPredicted RBP13.42□□□□□ -0.26
LRP8-211ENST00000496580 C12orf60Q5U649 245 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 KRT40Q6A162 431 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 ARMCX2Q7L311 632 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 CPXCR1Q8N123 301 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 CCDC17Q96LX7 622 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 SLF1Q9BQI6 1058 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.42□□□□□ -0.26
LRP8-211ENST00000496580 KATNBL1Q9H079 304 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
LRP8-211ENST00000496580 MTIF3Q9H2K0 278 aaKnown RBP13.42□□□□□ -0.26
LRP8-211ENST00000496580 SPC25Q9HBM1 224 aa13.42□□□□□ -0.26
LRP8-211ENST00000496580 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 EPOPA6NHQ4 379 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 USP17L21D6R901 530 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 CXCL17Q6UXB2 119 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
LRP8-211ENST00000496580 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 KHSRPQ92945 711 aaKnown RBP eCLIP13.41□□□□□ -0.26
LRP8-211ENST00000496580 SCLYQ96I15 445 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 ABHD16BQ9H3Z7 469 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
LRP8-211ENST00000496580 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
LRP8-211ENST00000496580 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
LRP8-211ENST00000496580 FAM86C2PA6NEL3 165 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 ZBBXA8MT70 800 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 ERC2O15083 957 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 B4GALT4O60513 344 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 IGHDP01880 384 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 CCDC144CPQ8IYA2 1237 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 NOC4LQ9BVI4 516 aaKnown RBP13.4□□□□□ -0.26
LRP8-211ENST00000496580 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 ATP8A2Q9NTI2 1148 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 HCN4Q9Y3Q4 1203 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 MTCH2Q9Y6C9 303 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
LRP8-211ENST00000496580 PRRC2BQ5JSZ5 2229 aaKnown RBP13.4□□□□□ -0.26
LRP8-211ENST00000496580 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 NDUFB10O96000 172 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 ADD2P35612 726 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 PSMC6P62333 389 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 TTLL4Q14679 1199 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■■□ 19.5
LRP8-211ENST00000496580 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 ANKRD35Q8N283 1001 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
LRP8-211ENST00000496580 WDFY4Q6ZS81 3184 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
LRP8-211ENST00000496580 CA3P07451 260 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
LRP8-211ENST00000496580 NKX3-2P78367 333 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 AAK1Q2M2I8 961 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 TMEM63BQ5T3F8 832 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 TLK2Q86UE8 772 aa13.38□□□□□ -0.27
LRP8-211ENST00000496580 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms