RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 SPZ1Q9BXG8 430 aa16.91■□□□□ 0.3
CHPF2-204ENST00000495645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.91■□□□□ 0.3
CHPF2-204ENST00000495645 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
CHPF2-204ENST00000495645 CCDC194A0A1B0GVG4 234 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
CHPF2-204ENST00000495645 SNHG28P0DPA3 235 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 SLC1A4P43007 532 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 FKBP1AP62942 108 aaKnown RBP16.9■□□□□ 0.3
CHPF2-204ENST00000495645 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 TRIM5Q9C035 493 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 RIOX1Q9H6W3 641 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 F5H6K3 240 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 TGFB2P61812 414 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 KLRC3Q07444 240 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 ARID5BQ14865 1188 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 DHX40Q8IX18 779 aaKnown RBP16.9■□□□□ 0.3
CHPF2-204ENST00000495645 EHD4Q9H223 541 aa16.9■□□□□ 0.3
CHPF2-204ENST00000495645 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USP17L6PQ6QN14 398 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
CHPF2-204ENST00000495645 EDIL3O43854 480 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
CHPF2-204ENST00000495645 STX1AQ16623 288 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 USH1GQ495M9 461 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 CIAPIN1Q6FI81 312 aa16.89■□□□□ 0.29
CHPF2-204ENST00000495645 C16orf45Q96MC5 204 aaPredicted RBP16.89■□□□□ 0.29
CHPF2-204ENST00000495645 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 SMYD4Q8IYR2 804 aaPredicted RBP16.88■□□□□ 0.29
CHPF2-204ENST00000495645 C4orf32Q8N8J7 132 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 BLZF1Q9H2G9 400 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 FOCADQ5VW36 1801 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
CHPF2-204ENST00000495645 CCNT1O60563 726 aaKnown RBP16.88■□□□□ 0.29
CHPF2-204ENST00000495645 NDUFB10O96000 172 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 TBCKQ8TEA7 893 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 SPTLC3Q9NUV7 552 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 PRDM4Q9UKN5 801 aa16.88■□□□□ 0.29
CHPF2-204ENST00000495645 ATP2C1P98194 919 aaPredicted RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 KARSQ15046 597 aaKnown RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 LRRC15Q8TF66 581 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 TMOD2Q9NZR1 351 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 CTAGE5O15320 804 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 CALML3P27482 149 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 GMPSP49915 693 aaPredicted RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 ZFP91Q96JP5 570 aaPredicted RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
CHPF2-204ENST00000495645 HDAC9Q9UKV0 1011 aa16.87■□□□□ 0.29
CHPF2-204ENST00000495645 TMEM232C9JQI7 657 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
CHPF2-204ENST00000495645 TDP2O95551 362 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 TNNI2P48788 182 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 RASA3Q14644 834 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 QRICH1Q2TAL8 776 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 ENTPD3O75355 529 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 NAA30Q147X3 362 aaPredicted RBP16.86■□□□□ 0.29
CHPF2-204ENST00000495645 ASPRV1Q53RT3 343 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 TRMT44Q8IYL2 757 aaKnown RBP16.86■□□□□ 0.29
CHPF2-204ENST00000495645 CCDC17Q96LX7 622 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 MTRQ99707 1265 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
CHPF2-204ENST00000495645 BECN2A8MW95 431 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 SOGA3Q5TF21 947 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
CHPF2-204ENST00000495645 TMEM179Q6ZVK1 233 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 REXO1Q8N1G1 1221 aaKnown RBP16.85■□□□□ 0.29
CHPF2-204ENST00000495645 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
CHPF2-204ENST00000495645 SLC37A4O43826 429 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 CBX1P83916 185 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 POSTNQ15063 836 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 SLC30A10Q6XR72 485 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 FAM151AQ8WW52 585 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 SH3GLB2Q9NR46 395 aa16.84■□□□□ 0.29
CHPF2-204ENST00000495645 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms