RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 HPSEQ9Y251 543 aa9.71□□□□□ -0.86
VTI1A-207ENST00000489357 MYH2Q9UKX2 1941 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 MINDY4BA8MYZ0 360 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 USP17L12C9JPN9 530 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 USP17L21D6R901 530 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 H7C1D1 291 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 NEMFO60524 1076 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 POLR3DP05423 398 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 LMOD1P29536 600 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 TRAPPC10P48553 1259 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 GNAQP50148 359 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 TPM4P67936 248 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 HDLBPQ00341 1268 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 CEBPZQ03701 1054 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 TROAPQ12815 778 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 RRP12Q5JTH9 1297 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 KANK3Q6NY19 840 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 NYAP1Q6ZVC0 841 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 CTCFLQ8NI51 663 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 PHKBQ93100 1093 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 MRFAP1L1Q96HT8 127 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 PYM1Q9BRP8 204 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 GOLPH3LQ9H4A5 285 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 SH3GLB2Q9NR46 395 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 MKRN1Q9UHC7 482 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 CLIC4Q9Y696 253 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 DDX60LQ5H9U9 1706 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 NAV1Q8NEY1 1877 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 MYH6P13533 1939 aa9.7□□□□□ -0.86
VTI1A-207ENST00000489357 BAZ2AQ9UIF9 1905 aaKnown RBP9.7□□□□□ -0.86
VTI1A-207ENST00000489357 MROH7-TTC4A0A0A0MT08 1334 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 KIF28PB7ZC32 967 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 ZNF202O95125 648 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 PRDX5P30044 214 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 FUT2Q10981 343 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 IQCB1Q15051 598 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 DIXDC1Q155Q3 683 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 CT47A1Q5JQC4 288 aaPredicted RBP9.69□□□□□ -0.86
VTI1A-207ENST00000489357 MFSD14BQ5SR56 506 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 C12orf60Q5U649 245 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 RESP18Q5W5W9 173 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 GALNT17Q6IS24 598 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 PLA2G4DQ86XP0 818 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 DIS3L2Q8IYB7 885 aaKnown RBP9.69□□□□□ -0.86
VTI1A-207ENST00000489357 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 LZTS2Q9BRK4 669 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 SENP2Q9HC62 589 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 MYOZ2Q9NPC6 264 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
VTI1A-207ENST00000489357 SMTNL1A8MU46 457 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 BECN2A8MW95 431 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 WNT10BO00744 389 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 IKBKBO14920 756 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
VTI1A-207ENST00000489357 DTNBO60941 627 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 PFKFB1P16118 471 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 CALML3P27482 149 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 SMARCA1P28370 1054 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 SYKP43405 635 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 NDUFA8P51970 172 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 DYNLL1P63167 89 aaKnown RBP9.68□□□□□ -0.86
VTI1A-207ENST00000489357 TMTC3Q6ZXV5 915 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 TRIML1Q8N9V2 468 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 FERMT2Q96AC1 680 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 PHF20Q9BVI0 1012 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 FTOQ9C0B1 505 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTI1A-207ENST00000489357 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.86
VTI1A-207ENST00000489357 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 HCSTQ9UBK5 93 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 TUBE1Q9UJT0 475 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 FOCADQ5VW36 1801 aa9.68□□□□□ -0.86
VTI1A-207ENST00000489357 GAKO14976 1311 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 GPR75-ASB3A0A0A6YYF3 556 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 TSPY2A6NKD2 308 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 TPM2P07951 284 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 KRT2P35908 639 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 ZNF75DP51815 510 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 NLRP12P59046 1061 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 USP46P62068 366 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 CHAF1AQ13111 956 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-207ENST00000489357 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 KIF4BQ2VIQ3 1234 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 TBC1D10BQ4KMP7 808 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-207ENST00000489357 MAP1SQ66K74 1059 aaPredicted RBP9.67□□□□□ -0.86
VTI1A-207ENST00000489357 OTUD7BQ6GQQ9 843 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 HHIPL2Q6UWX4 724 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 LUZP1Q86V48 1076 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 DNAJC5GQ8N7S2 189 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
VTI1A-207ENST00000489357 MYL10Q9BUA6 226 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms