RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 CYBAP13498 195 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 TRDNQ13061 729 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 UBAC1Q9BSL1 405 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 PPP4R2Q9NY27 417 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 FBXO40Q9UH90 709 aa18.71■□□□□ 0.59
CTDSP1-209ENST00000488627 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 TKFCQ3LXA3 575 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 GPATCH4Q5T3I0 446 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 CCDC174Q6PII3 467 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 FGD4Q96M96 766 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 LAMA4Q16363 1823 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 ZNF236Q9UL36 1845 aa18.7■□□□□ 0.58
CTDSP1-209ENST00000488627 SLC27A2O14975 620 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 CDC45O75419 566 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 FARP2O94887 1054 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 ICAM1P05362 532 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 ANTXR2P58335 489 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 MB21D2Q8IYB1 491 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 TINF2Q9BSI4 451 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 SENP2Q9HC62 589 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 ANO2Q9NQ90 1003 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 HOMER2Q9NSB8 354 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 RNF146Q9NTX7 359 aa18.69■□□□□ 0.58
CTDSP1-209ENST00000488627 COL11A1P12107 1806 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 MUM1L1Q5H9M0 696 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 CREB3L3Q68CJ9 461 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 CHST3Q7LGC8 479 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 ANKLE1Q8NAG6 615 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 UBA5Q9GZZ9 404 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 ACAD9Q9H845 621 aa18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
CTDSP1-209ENST00000488627 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 ALAS1P13196 640 aa18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 RALYLQ86SE5 291 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 A1CFQ9NQ94 594 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 CCPG1Q9ULG6 757 aa18.67■□□□□ 0.58
CTDSP1-209ENST00000488627 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 CNTN2Q02246 1040 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 ZNF467Q7Z7K2 595 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 STAG2Q8N3U4 1231 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 FAM133AQ8N9E0 248 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
CTDSP1-209ENST00000488627 SEPT4O43236 478 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 MSCO60682 206 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 PARP1P09874 1014 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 ZNF865P0CJ78 1059 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 CNGA1P29973 690 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 CASC1Q6TDU7 716 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 ADGRF4Q8IZF3 695 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 CLEC4DQ8WXI8 215 aa18.65■□□□□ 0.58
CTDSP1-209ENST00000488627 PALM3A6NDB9 673 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 SOWAHBA6NEL2 793 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 TROAPQ12815 778 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 SLC35G1Q2M3R5 365 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 GPHNQ9NQX3 736 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 CYP39A1Q9NYL5 469 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 MAD2L2Q9UI95 211 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 SYNGAP1Q96PV0 1343 aa18.64■□□□□ 0.57
CTDSP1-209ENST00000488627 POTEB2H3BUK9 544 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 NFIBO00712 420 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 COL6A1P12109 1028 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 WTAPQ15007 396 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 TSGA10IPQ3SY00 556 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 NECAB2Q7Z6G3 386 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 MTA3Q9BTC8 594 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 JMJD4Q9H9V9 463 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 LY9Q9HBG7 655 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 PNMA2Q9UL42 364 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 ASTN1O14525 1302 aa18.63■□□□□ 0.57
CTDSP1-209ENST00000488627 ERICH2A1L162 156 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 PRC1O43663 620 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 GRM4Q14833 912 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 SART3Q15020 963 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 PRPF38BQ5VTL8 546 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 ANO1Q5XXA6 986 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 RASEFQ8IZ41 740 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 MTMR8Q96EF0 704 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 PURBQ96QR8 312 aaKnown RBP18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 PFASO15067 1338 aa18.62■□□□□ 0.57
CTDSP1-209ENST00000488627 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms