RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 SEC23AQ15436 765 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 CREB3L3Q68CJ9 461 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 CHST13Q8NET6 341 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 HOMER2Q9NSB8 354 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 ZNF536O15090 1300 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 MKI67P46013 3256 aaKnown RBP16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 ZNF236Q9UL36 1845 aa16.59■□□□□ 0.25
PFKFB3-213ENST00000487989 ERICH2A1L162 156 aa16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 ALAS1P13196 640 aa16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 CCND3P30281 292 aaPredicted RBP16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 ZNF792Q3KQV3 632 aa16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 CHST3Q7LGC8 479 aa16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 ANKRD35Q8N283 1001 aa16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 RANBP17Q9H2T7 1088 aaKnown RBP16.58■□□□□ 0.24
PFKFB3-213ENST00000487989 IGHA2P01877 340 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 ICAM1P05362 532 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 CAPN2P17655 700 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 TKFCQ3LXA3 575 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 MB21D2Q8IYB1 491 aaPredicted RBP16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 CRISPLD2Q9H0B8 497 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 ACAD9Q9H845 621 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 RNF146Q9NTX7 359 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 CCPG1Q9ULG6 757 aa16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
PFKFB3-213ENST00000487989 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 CNGA1P29973 690 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 ANTXR2P58335 489 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 WTAPQ15007 396 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 RNF20Q5VTR2 975 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
PFKFB3-213ENST00000487989 PRAMEF19Q5SWL8 479 aa16.55■□□□□ 0.24
PFKFB3-213ENST00000487989 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
PFKFB3-213ENST00000487989 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
PFKFB3-213ENST00000487989 TINF2Q9BSI4 451 aa16.55■□□□□ 0.24
PFKFB3-213ENST00000487989 SENP2Q9HC62 589 aa16.55■□□□□ 0.24
PFKFB3-213ENST00000487989 PRC1O43663 620 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 FARP2O94887 1054 aaPredicted RBP16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 CYBAP13498 195 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 TAL1P17542 331 aaPredicted RBP16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 MCM5P33992 734 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 MUM1L1Q5H9M0 696 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 ADGRF4Q8IZF3 695 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 PNMA2Q9UL42 364 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 OGDHLQ9ULD0 1010 aa16.54■□□□□ 0.24
PFKFB3-213ENST00000487989 KLRF2D3W0D1 207 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 POTEB2H3BUK9 544 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 LHX8Q68G74 356 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 STAG2Q8N3U4 1231 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 VAT1LQ9HCJ6 419 aa16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 DDX20Q9UHI6 824 aaKnown RBP16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
PFKFB3-213ENST00000487989 PFASO15067 1338 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 MSCO60682 206 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 NSMFQ6X4W1 530 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 ZNF467Q7Z7K2 595 aaPredicted RBP16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 ANKLE1Q8NAG6 615 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 TMEM87BQ96K49 555 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 MTA3Q9BTC8 594 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 MAD2L2Q9UI95 211 aa16.52■□□□□ 0.24
PFKFB3-213ENST00000487989 WDR19Q8NEZ3 1342 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 PALM3A6NDB9 673 aaPredicted RBP16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 SEPT4O43236 478 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 TROAPQ12815 778 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 COL9A3Q14050 684 aaPredicted RBP16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 GRM4Q14833 912 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 TSGA10IPQ3SY00 556 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 USH1GQ495M9 461 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 PAWRQ96IZ0 340 aaKnown RBP16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 FGD4Q96M96 766 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 NEK1Q96PY6 1258 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 CYP39A1Q9NYL5 469 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 CNPY2Q9Y2B0 182 aa16.51■□□□□ 0.23
PFKFB3-213ENST00000487989 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 NFIBO00712 420 aa16.5■□□□□ 0.23
PFKFB3-213ENST00000487989 SH2B2O14492 632 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms