RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 RPTORQ8N122 1335 aa30.17■■■□□ 2.42
PDCD4-208ENST00000483670 EIF5BO60841 1220 aaKnown RBP30.16■■■□□ 2.42
PDCD4-208ENST00000483670 MYCP01106 439 aaPredicted RBP30.16■■■□□ 2.42
PDCD4-208ENST00000483670 SLC4A3P48751 1232 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 MAP3K21Q5TCX8 1036 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 CHST3Q7LGC8 479 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 CATIPQ7Z7H3 387 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 NEK1Q96PY6 1258 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 ACAD9Q9H845 621 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 HMX1Q9NP08 348 aaPredicted RBP30.16■■■□□ 2.42
PDCD4-208ENST00000483670 WDR19Q8NEZ3 1342 aa30.16■■■□□ 2.42
PDCD4-208ENST00000483670 HMGB1P09429 215 aaKnown RBP30.15■■■□□ 2.42
PDCD4-208ENST00000483670 CCDC174Q6PII3 467 aa30.15■■■□□ 2.42
PDCD4-208ENST00000483670 NPLOC4Q8TAT6 608 aa30.15■■■□□ 2.42
PDCD4-208ENST00000483670 DDX11Q96FC9 970 aa30.15■■■□□ 2.42
PDCD4-208ENST00000483670 UNC93B1Q9H1C4 597 aa30.15■■■□□ 2.42
PDCD4-208ENST00000483670 CCPG1Q9ULG6 757 aa30.15■■■□□ 2.42
PDCD4-208ENST00000483670 COBLO75128 1261 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 GOLGA8HP0CJ92 632 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 HSPA4P34932 840 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 CCL14Q16627 93 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 ANKRD35Q8N283 1001 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 KCNB2Q92953 911 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 AGBL1Q96MI9 1066 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 PAK6Q9NQU5 681 aaPredicted RBP30.14■■■□□ 2.42
PDCD4-208ENST00000483670 PLXNA1Q9UIW2 1896 aa30.14■■■□□ 2.42
PDCD4-208ENST00000483670 POTEFA5A3E0 1075 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 PRKAR2AP13861 404 aaKnown RBP30.13■■■□□ 2.41
PDCD4-208ENST00000483670 LIFRP42702 1097 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 TRERF1Q96PN7 1200 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 MAP3K14Q99558 947 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 LY9Q9HBG7 655 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 RNF146Q9NTX7 359 aa30.13■■■□□ 2.41
PDCD4-208ENST00000483670 ALAS1P13196 640 aa30.12■■■□□ 2.41
PDCD4-208ENST00000483670 GJA8P48165 433 aa30.12■■■□□ 2.41
PDCD4-208ENST00000483670 MAML3Q96JK9 1138 aa30.12■■■□□ 2.41
PDCD4-208ENST00000483670 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.12■■■□□ 2.414e-6■■■■□ 22.2
PDCD4-208ENST00000483670 HOMER2Q9NSB8 354 aa30.12■■■□□ 2.41
PDCD4-208ENST00000483670 PFASO15067 1338 aa30.12■■■□□ 2.41
PDCD4-208ENST00000483670 SH2B2O14492 632 aaPredicted RBP30.11■■■□□ 2.41
PDCD4-208ENST00000483670 DDAH1O94760 285 aa30.11■■■□□ 2.41
PDCD4-208ENST00000483670 CACNB2Q08289 660 aaPredicted RBP30.11■■■□□ 2.41
PDCD4-208ENST00000483670 TROAPQ12815 778 aa30.11■■■□□ 2.41
PDCD4-208ENST00000483670 GRM4Q14833 912 aa30.11■■■□□ 2.41
PDCD4-208ENST00000483670 ZNF792Q3KQV3 632 aa30.11■■■□□ 2.41
PDCD4-208ENST00000483670 MSL3Q8N5Y2 521 aaKnown RBP30.11■■■□□ 2.41
PDCD4-208ENST00000483670 FLRT1Q9NZU1 646 aa30.11■■■□□ 2.41
PDCD4-208ENST00000483670 BRCA2P51587 3418 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 PALM3A6NDB9 673 aaPredicted RBP30.1■■■□□ 2.41
PDCD4-208ENST00000483670 CCDC69A6NI79 296 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 IGHA2P01877 340 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 SNAP25P60880 206 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 TRIM32Q13049 653 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 NFXL1Q6ZNB6 911 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 DHX32Q7L7V1 743 aaKnown RBP30.1■■■□□ 2.41
PDCD4-208ENST00000483670 RASEFQ8IZ41 740 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 UBA5Q9GZZ9 404 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 MAD2L2Q9UI95 211 aa30.1■■■□□ 2.41
PDCD4-208ENST00000483670 DNAJC25-GNG10A0A024R161 153 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 KLRF2D3W0D1 207 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 DHX16O60231 1041 aaKnown RBP30.09■■■□□ 2.41
PDCD4-208ENST00000483670 SGPL1O95470 568 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 PGK2P07205 417 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 ADGRF4Q8IZF3 695 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 U2AF1L4Q8WU68 220 aaKnown RBP30.09■■■□□ 2.41
PDCD4-208ENST00000483670 MAF1Q9H063 256 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 NRBP1Q9UHY1 535 aa30.09■■■□□ 2.41
PDCD4-208ENST00000483670 CALM1P0DP23 149 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 CALM2P0DP24 149 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 CALM3P0DP25 149 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 KIF5BP33176 963 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 MLLT1Q03111 559 aaPredicted RBP30.08■■■□□ 2.41
PDCD4-208ENST00000483670 ZNF467Q7Z7K2 595 aaPredicted RBP30.08■■■□□ 2.41
PDCD4-208ENST00000483670 ZNF654Q8IZM8 581 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 SENP2Q9HC62 589 aa30.08■■■□□ 2.41
PDCD4-208ENST00000483670 MYH6P13533 1939 aa30.07■■■□□ 2.4
PDCD4-208ENST00000483670 EN2P19622 333 aaPredicted RBP30.07■■■□□ 2.4
PDCD4-208ENST00000483670 CDC37Q16543 378 aaPredicted RBP30.07■■■□□ 2.4
PDCD4-208ENST00000483670 SGMS1Q86VZ5 419 aa30.07■■■□□ 2.4
PDCD4-208ENST00000483670 CTCFLQ8NI51 663 aaPredicted RBP30.07■■■□□ 2.4
PDCD4-208ENST00000483670 DEFB118Q96PH6 123 aa30.07■■■□□ 2.4
PDCD4-208ENST00000483670 MSCO60682 206 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 PSMA5P28066 241 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 CYP2C19P33261 490 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 EXOSC10Q01780 885 aaKnown RBP30.06■■■□□ 2.4
PDCD4-208ENST00000483670 TRAF1Q13077 416 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 ADCK5Q3MIX3 580 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 STAG2Q8N3U4 1231 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 TINF2Q9BSI4 451 aa30.06■■■□□ 2.4
PDCD4-208ENST00000483670 A1CFQ9NQ94 594 aaKnown RBP30.06■■■□□ 2.4
PDCD4-208ENST00000483670 NUP133Q8WUM0 1156 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 LZTS2Q9BRK4 669 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 USP26Q9BXU7 913 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 CPVLQ9H3G5 476 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 JMJD4Q9H9V9 463 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 SNX14Q9Y5W7 946 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 SLC12A7Q9Y666 1083 aa30.05■■■□□ 2.4
PDCD4-208ENST00000483670 SYNGAP1Q96PV0 1343 aa30.04■■■□□ 2.4
PDCD4-208ENST00000483670 POTEB2H3BUK9 544 aa30.04■■■□□ 2.4
PDCD4-208ENST00000483670 GNAQP50148 359 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms