RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 OAZ1P54368 228 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 LRRC41Q15345 812 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 CHURC1Q8WUH1 139 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 FGD4Q96M96 766 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 DIS3Q9Y2L1 958 aaKnown RBP12.35□□□□□ -0.43
CPSF4-212ENST00000482251 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
CPSF4-212ENST00000482251 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 SMCHD1A6NHR9 2005 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 HIP1O00291 1037 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 ZNF213O14771 459 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 SNAI1O95863 264 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-212ENST00000482251 ZNF865P0CJ78 1059 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-212ENST00000482251 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
CPSF4-212ENST00000482251 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 RTP1P59025 263 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-212ENST00000482251 CNTN2Q02246 1040 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 MUM1L1Q5H9M0 696 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 ARRDC4Q8NCT1 418 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
CPSF4-212ENST00000482251 FBXO40Q9UH90 709 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
CPSF4-212ENST00000482251 LCTP09848 1927 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 B4E1Z4 1266 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 KDM4AO75164 1064 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 PDHBP11177 359 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 AKR1A1P14550 325 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 NOVP48745 357 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 TRIM60Q495X7 471 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 SYDE2Q5VT97 1194 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 ARMCX2Q7L311 632 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 TICAM2Q86XR7 235 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 ESR2Q92731 530 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 GDF15Q99988 308 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 RNF41Q9H4P4 317 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-212ENST00000482251 PRDM5Q9NQX1 630 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-212ENST00000482251 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.33□□□□□ -0.44
CPSF4-212ENST00000482251 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 SYNRGQ9UMZ2 1314 aa12.33□□□□□ -0.44
CPSF4-212ENST00000482251 LTBP2Q14767 1821 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-212ENST00000482251 ADCY6O43306 1168 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 FDX1P10109 184 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 IRX5P78411 483 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-212ENST00000482251 IMMTQ16891 758 aaKnown RBP12.32□□□□□ -0.44
CPSF4-212ENST00000482251 NSMFQ6X4W1 530 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 CCDC144CPQ8IYA2 1237 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
CPSF4-212ENST00000482251 DSCC1Q9BVC3 393 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 CPVLQ9H3G5 476 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
CPSF4-212ENST00000482251 PLA2G6O60733 806 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 ICAM1P05362 532 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 PCP11498 1178 aaKnown RBP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 PTGS1P23219 599 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 MAMDC4Q6UXC1 1216 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 SLC39A5Q6ZMH5 540 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 RNF180Q86T96 592 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 LRCH3Q96II8 777 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 RANBP17Q9H2T7 1088 aaKnown RBP12.31□□□□□ -0.44
CPSF4-212ENST00000482251 ASTN1O14525 1302 aa12.31□□□□□ -0.44
CPSF4-212ENST00000482251 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-212ENST00000482251 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 NFIBO00712 420 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 ADAMTS4O75173 837 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 EEPD1Q7L9B9 569 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-212ENST00000482251 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 PRKAG2Q9UGJ0 569 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 PHF24Q9UPV7 400 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 TNKSO95271 1327 aa12.3□□□□□ -0.44
CPSF4-212ENST00000482251 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-212ENST00000482251 PTPDC1A2A3K4 754 aa12.29□□□□□ -0.44
CPSF4-212ENST00000482251 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms