RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 PTGS1P23219 599 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 CNTN2Q02246 1040 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 FAM160B2Q86V87 743 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 ABRAQ8N0Z2 381 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 ANKS1AQ92625 1134 aa13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 PAWRQ96IZ0 340 aaKnown RBP13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF1-207ENST00000481260 PLA2G6O60733 806 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 ALAS1P13196 640 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 CNGA1P29973 690 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 MFSD14CQ5VZR4 134 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 OLFML2BQ68BL8 750 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 BTNL9Q6UXG8 535 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 STAG2Q8N3U4 1231 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 CHURC1Q8WUH1 139 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 TTC14Q96N46 770 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 OGDHLQ9ULD0 1010 aa13.4□□□□□ -0.26
RAPGEF1-207ENST00000481260 ZNFX1Q9P2E3 1918 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 SLC27A2O14975 620 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 ADCY6O43306 1168 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 SNAI1O95863 264 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 KCTD2Q14681 263 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 TRMT44Q8IYL2 757 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 KRT23Q9C075 422 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 ANO2Q9NQ90 1003 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 A1CFQ9NQ94 594 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 PFASO15067 1338 aa13.39□□□□□ -0.27
RAPGEF1-207ENST00000481260 NFIBO00712 420 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 OAZ1P54368 228 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 CREB3L3Q68CJ9 461 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 TINF2Q9BSI4 451 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 LRRC2Q9BYS8 371 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 KAT14Q9H8E8 782 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
RAPGEF1-207ENST00000481260 H0YGN5 161 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 ICAM1P05362 532 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 NEFLP07196 543 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 NECTIN1Q15223 517 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 ANKRD35Q8N283 1001 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 CHST13Q8NET6 341 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 DDX11Q96FC9 970 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
RAPGEF1-207ENST00000481260 PLXNA1Q9UIW2 1896 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 IFIT3O14879 490 aaKnown RBP13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 PPP1R11O60927 126 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 CDC45O75419 566 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 GJC2Q5T442 439 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 SLC30A10Q6XR72 485 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 ADGRF4Q8IZF3 695 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 FAM133AQ8N9E0 248 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 IGDCC4Q8TDY8 1250 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 KATNBL1Q9H079 304 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 VAT1LQ9HCJ6 419 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 LCTP09848 1927 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 ALPK3Q96L96 1907 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 FRMPD3Q5JV73 1810 aa13.36□□□□□ -0.27
RAPGEF1-207ENST00000481260 COL6A1P12109 1028 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 COPB2P35606 906 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 BAATQ14032 418 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 CDC37Q16543 378 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 ADCK5Q3MIX3 580 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 USH1GQ495M9 461 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 PRPF38BQ5VTL8 546 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 NSMFQ6X4W1 530 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 KIAA1211Q6ZU35 1233 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 NCOA7Q8NI08 942 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 DPF3Q92784 378 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 JMJD4Q9H9V9 463 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 LY9Q9HBG7 655 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 CYP39A1Q9NYL5 469 aa13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 DIS3Q9Y2L1 958 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-207ENST00000481260 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
RAPGEF1-207ENST00000481260 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms