RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 E2F5Q15329 346 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 CCDC102BQ68D86 513 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHD6-208ENST00000480022 KIAA1328Q86T90 577 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 CNGA4Q8IV77 575 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 ZNF473Q8WTR7 871 aaKnown RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 CCDC51Q96ER9 411 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 RUFY1Q96T51 708 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 COL4A1P02462 1669 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 IFT88Q13099 833 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 GRAPQ13588 217 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 FUKQ8N0W3 1084 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 BATF3Q9NR55 127 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 WWC3Q9ULE0 1092 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 TPX2Q9ULW0 747 aaKnown RBP12.14□□□□□ -0.47
CHD6-208ENST00000480022 SAR1BQ9Y6B6 198 aa12.14□□□□□ -0.47
CHD6-208ENST00000480022 TEX33O43247 280 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 FECHP22830 423 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 PDIA3P30101 505 aaKnown RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 LSP1P33241 339 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 TTMPQ5BVD1 217 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 EAF2Q96CJ1 260 aaPredicted RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
CHD6-208ENST00000480022 CCDC70Q6NSX1 233 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 MICAL1Q8TDZ2 1067 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 ARL8AQ96BM9 186 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 SPDL1Q96EA4 605 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 FAM210AQ96ND0 272 aa12.13□□□□□ -0.47
CHD6-208ENST00000480022 PSMD14O00487 310 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
CHD6-208ENST00000480022 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 CASP14P31944 242 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 ALS2CLQ60I27 953 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 MAN1B1Q9UKM7 699 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 KIF13BQ9NQT8 1826 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 PPP6R2O75170 966 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 SNUPNO95149 360 aaKnown RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 ALDH1B1P30837 517 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 IGHMBP2P38935 993 aaKnown RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 TRAF1Q13077 416 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 HOOK2Q96ED9 719 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 SAAL1Q96ER3 474 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 CAPZA3Q96KX2 299 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 PUS3Q9BZE2 481 aaKnown RBP12.12□□□□□ -0.47
CHD6-208ENST00000480022 LAMA4Q16363 1823 aa12.12□□□□□ -0.47
CHD6-208ENST00000480022 ENC1O14682 589 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 HSF2BPO75031 334 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
CHD6-208ENST00000480022 PBX1P40424 430 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 LRRC24Q50LG9 513 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 KDM7AQ6ZMT4 941 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 SLC51AQ86UW1 340 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 MYH3P11055 1940 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 BBOX1O75936 387 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 PEX19P40855 299 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 ERVK-24P63145 666 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 PTGISQ16647 500 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 NLRP14Q86W24 1093 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 LMBR1Q8WVP7 490 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 CNKSR1Q969H4 720 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
CHD6-208ENST00000480022 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
CHD6-208ENST00000480022 GUCA1BQ9UMX6 200 aa12.11□□□□□ -0.47
CHD6-208ENST00000480022 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 SRGAP2O75044 1071 aa12.1□□□□□ -0.47
CHD6-208ENST00000480022 AP1G2O75843 785 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms