RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 IGHA2P01877 340 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 SNHG28P0DPA3 235 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 CYBAP13498 195 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 COPB2P35606 906 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 TRDNQ13061 729 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 OLFML2BQ68BL8 750 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 LHX8Q68G74 356 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 UBE2Q1Q7Z7E8 422 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 GPHNQ9NQX3 736 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 CCPG1Q9ULG6 757 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 LAMA4Q16363 1823 aa15.44■□□□□ 0.06
NIPAL3-206ENST00000475663 SLC27A2O14975 620 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 OAZ1P54368 228 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 ANTXR2P58335 489 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 SEC23AQ15436 765 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 IFIT1BQ5T764 474 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 BTNL9Q6UXG8 535 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 RALYLQ86SE5 291 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 ANKS1AQ92625 1134 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 PURBQ96QR8 312 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 SLC5A4Q9NY91 659 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 PCDH10Q9P2E7 1040 aa15.43■□□□□ 0.06
NIPAL3-206ENST00000475663 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 CDC45O75419 566 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 CCDC178Q5BJE1 867 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 STAG2Q8N3U4 1231 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 NCOA7Q8NI08 942 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 LENG1Q96BZ8 264 aaPredicted RBP15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 FGD4Q96M96 766 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 TINF2Q9BSI4 451 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 ACAD9Q9H845 621 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 OGDHLQ9ULD0 1010 aa15.42■□□□□ 0.06
NIPAL3-206ENST00000475663 DNAJC25-GNG10A0A024R161 153 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 FDX1P10109 184 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 CREB3L3Q68CJ9 461 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 MB21D2Q8IYB1 491 aaPredicted RBP15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 DPF3Q92784 378 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 PPP4R2Q9NY27 417 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
NIPAL3-206ENST00000475663 ZNF236Q9UL36 1845 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 NFIBO00712 420 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 DHX16O60231 1041 aaKnown RBP15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 ICAM1P05362 532 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 NECTIN1Q15223 517 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 USH1GQ495M9 461 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 ADGRF4Q8IZF3 695 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 MYL10Q9BUA6 226 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 LRRC2Q9BYS8 371 aa15.4■□□□□ 0.06
NIPAL3-206ENST00000475663 SOWAHBA6NEL2 793 aa15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 POTEB2H3BUK9 544 aa15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 WTAPQ15007 396 aa15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 GPATCH4Q5T3I0 446 aaKnown RBP15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 RAB11FIP4Q86YS3 637 aa15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 ZHX1Q9UKY1 873 aaPredicted RBP15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 DIS3Q9Y2L1 958 aaKnown RBP15.39■□□□□ 0.05
NIPAL3-206ENST00000475663 SEPT4O43236 478 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 PRC1O43663 620 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 ZNF865P0CJ78 1059 aaPredicted RBP15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 BAATQ14032 418 aaPredicted RBP15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 CDC37Q16543 378 aaPredicted RBP15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 SLC35G1Q2M3R5 365 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 TKFCQ3LXA3 575 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 CASC1Q6TDU7 716 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 NECAB2Q7Z6G3 386 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 IGDCC4Q8TDY8 1250 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 ASTN1O14525 1302 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 PFASO15067 1338 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 PDE4DIPQ5VU43 2346 aa15.38■□□□□ 0.05
NIPAL3-206ENST00000475663 ERICH2A1L162 156 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 H0YGN5 161 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 PTGS1P23219 599 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 NT5C2P49902 561 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 PRPF38BQ5VTL8 546 aaKnown RBP15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 ARMCX2Q7L311 632 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
NIPAL3-206ENST00000475663 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms