RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 TMEM179Q6ZVK1 233 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 NEK8Q86SG6 692 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 OGFOD1Q8N543 542 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 MKL1Q969V6 931 aa17.43■□□□□ 0.38
RPUSD3-215ENST00000475470 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 SEPT2Q15019 361 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 E2F4Q16254 413 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 XPO4Q9C0E2 1151 aaKnown RBP17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 PYCARDQ9ULZ3 195 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 GDF11O95390 407 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 PRPHP41219 470 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 SLC1A4P43007 532 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 ICA1Q05084 483 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 DLGAP5Q15398 846 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 KIAA1524Q8TCG1 905 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 TBCKQ8TEA7 893 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 CSRNP1Q96S65 589 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 HSD3B7Q9H2F3 369 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 TMEM260Q9NX78 707 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 PSME4Q14997 1843 aa17.42■□□□□ 0.38
RPUSD3-215ENST00000475470 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 USP17L10C9JJH3 530 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 CDC25AP30304 524 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 FANCCQ00597 558 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 DPYDQ12882 1025 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 DCAF4Q8WV16 495 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 GSDMAQ96QA5 445 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 TCP10L2B9ZVM9 353 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 ZBTB5O15062 677 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 NEMFO60524 1076 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 CASP1P29466 404 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 LRMPQ12912 555 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 C17orf53Q8N3J3 647 aaPredicted RBP17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 RASSF8Q8NHQ8 419 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 STAMQ92783 540 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 FANCLQ9NW38 375 aa17.41■□□□□ 0.38
RPUSD3-215ENST00000475470 MYO1BO43795 1136 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 OR52Z1P0C646 297 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 ATP1A3P13637 1013 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 UBA7P41226 1012 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 STAT6P42226 847 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 GMLQ99445 158 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 CLRN2A0PK11 232 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 SERPINC1P01008 464 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 KARSQ15046 597 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 CACTINQ8WUQ7 758 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
RPUSD3-215ENST00000475470 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 ORC2Q13416 577 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 ENOX1Q8TC92 643 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 MTMR8Q96EF0 704 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 DISC1Q9NRI5 854 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 ZBTB7AO95365 584 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 GH2P01242 217 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 RRAGBQ5VZM2 374 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 LRRC8AQ8IWT6 810 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 IMPACTQ9P2X3 320 aa17.39■□□□□ 0.37
RPUSD3-215ENST00000475470 PP2D1A8MPX8 630 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 ERCC5P28715 1186 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 UBASH3AP57075 661 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 TGFB2P61812 414 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 FMR1Q06787 632 aaKnown RBP eCLIP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 CT47A1Q5JQC4 288 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 DNTTIP2Q5QJE6 756 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 CUL5Q93034 780 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 COL4A5P29400 1685 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 F5H6K3 240 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 GSDMDP57764 484 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 KLRC3Q07444 240 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 FAM151AQ8WW52 585 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 AK8Q96MA6 479 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 SPTLC3Q9NUV7 552 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 NFE2L3Q9Y4A8 694 aa17.38■□□□□ 0.37
RPUSD3-215ENST00000475470 TMC6Q7Z403 805 aa17.37■□□□□ 0.37
RPUSD3-215ENST00000475470 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms