RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 UBA5Q9GZZ9 404 aa20.68■□□□□ 0.9
RPUSD3-214ENST00000473522 LY9Q9HBG7 655 aa20.68■□□□□ 0.9
RPUSD3-214ENST00000473522 SLC5A4Q9NY91 659 aa20.68■□□□□ 0.9
RPUSD3-214ENST00000473522 ZSWIM8A7E2V4 1837 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 SH2B2O14492 632 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 CCL5P13501 91 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 SNAP25P60880 206 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 OLFML2BQ68BL8 750 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 GPHNQ9NQX3 736 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 MAD2L2Q9UI95 211 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 WDR19Q8NEZ3 1342 aa20.67■□□□□ 0.9
RPUSD3-214ENST00000473522 DNAJC25-GNG10A0A024R161 153 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 GJB1P08034 283 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 HMGB1P09429 215 aaKnown RBP20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 SOX10P56693 466 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 TRIM32Q13049 653 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 STAG2Q8N3U4 1231 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 FLRT1Q9NZU1 646 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 SNX14Q9Y5W7 946 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 A0A0G2JMZ2 1700 aa20.66■□□□□ 0.9
RPUSD3-214ENST00000473522 LAMA4Q16363 1823 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 RPTORQ8N122 1335 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 POTEFA5A3E0 1075 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 CAPN2P17655 700 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 GRM4Q14833 912 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 CCDC174Q6PII3 467 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 CATIPQ7Z7H3 387 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 SGMS1Q86VZ5 419 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 ADGRF4Q8IZF3 695 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 TRERF1Q96PN7 1200 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 RNF208Q9H0X6 261 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 UNC93B1Q9H1C4 597 aa20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 PAK6Q9NQU5 681 aaPredicted RBP20.65■□□□□ 0.9
RPUSD3-214ENST00000473522 KLRF2D3W0D1 207 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 CACNB2Q08289 660 aaPredicted RBP20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 MTMR8Q96EF0 704 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 MAML3Q96JK9 1138 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 CPVLQ9H3G5 476 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 JMJD4Q9H9V9 463 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 CCPG1Q9ULG6 757 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 CENPFP49454 3210 aa20.64■□□□□ 0.89
RPUSD3-214ENST00000473522 MYCP01106 439 aaPredicted RBP20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 PGK2P07205 417 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 ALAS1P13196 640 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 GJA8P48165 433 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 MFSD14CQ5VZR4 134 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 ANKRD35Q8N283 1001 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 DDX11Q96FC9 970 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 RIOX1Q9H6W3 641 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 HMX1Q9NP08 348 aaPredicted RBP20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 RNF146Q9NTX7 359 aa20.63■□□□□ 0.89
RPUSD3-214ENST00000473522 DDAH1O94760 285 aa20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 EN2P19622 333 aaPredicted RBP20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 SMARCA1P28370 1054 aa20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 ZNF654Q8IZM8 581 aa20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 MSL3Q8N5Y2 521 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 MAF1Q9H063 256 aa20.62■□□□□ 0.89
RPUSD3-214ENST00000473522 EIF5BO60841 1220 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 SGPL1O95470 568 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 MUM1L1Q5H9M0 696 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 MAMDC4Q6UXC1 1216 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 ZNF467Q7Z7K2 595 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 RGS22Q8NE09 1264 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 CLEC4DQ8WXI8 215 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 CRISPLD2Q9H0B8 497 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 A1CFQ9NQ94 594 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 HOMER2Q9NSB8 354 aa20.61■□□□□ 0.89
RPUSD3-214ENST00000473522 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CALM1P0DP23 149 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CALM2P0DP24 149 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CALM3P0DP25 149 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 PSMA5P28066 241 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CYP2C19P33261 490 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CDC37Q16543 378 aaPredicted RBP20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 FAM133AQ8N9E0 248 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 TINF2Q9BSI4 451 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 VAT1LQ9HCJ6 419 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CYP39A1Q9NYL5 469 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 SLC12A7Q9Y666 1083 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 MYH4Q9Y623 1939 aa20.6■□□□□ 0.89
RPUSD3-214ENST00000473522 CYTH3O43739 400 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 KIF5BP33176 963 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 QRICH1Q2TAL8 776 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 NFXL1Q6ZNB6 911 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 U2AF1L4Q8WU68 220 aaKnown RBP20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 NUP133Q8WUM0 1156 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 JAKMIP1Q96N16 626 aaKnown RBP20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 LZTS2Q9BRK4 669 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 TM6SF1Q9BZW5 370 aa20.59■□□□□ 0.89
RPUSD3-214ENST00000473522 MGAMO43451 1857 aa20.58■□□□□ 0.89
RPUSD3-214ENST00000473522 PFASO15067 1338 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms