RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 SLC5A4Q9NY91 659 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 MTMR7Q9Y216 660 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 COL6A3P12111 3177 aa11.61□□□□□ -0.55
RPRD1B-204ENST00000471511 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 PLXNA1Q9UIW2 1896 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 RBAK-RBAKDNI3L0D1 243 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 ORC4O43929 436 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 RANBP6O60518 1105 aaKnown RBP11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 SLC16A2P36021 539 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 MCMDC2Q4G0Z9 681 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 BADQ92934 168 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 DDX11Q96FC9 970 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 STX8Q9UNK0 236 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 SYNRGQ9UMZ2 1314 aa11.6□□□□□ -0.55
RPRD1B-204ENST00000471511 A0A1W2PQ45 241 aaPredicted RBP11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 A0A1W2PQY0 241 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 TSPY2A6NKD2 308 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 KBTBD13C9JR72 458 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 RARBP10826 455 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 SLC1A4P43007 532 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 NUCB1Q02818 461 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 SHHQ15465 462 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 CCDC174Q6PII3 467 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 CCDC144CPQ8IYA2 1237 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 TMEM47Q9BQJ4 181 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 ZHX1Q9UKY1 873 aaPredicted RBP11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
RPRD1B-204ENST00000471511 LTBP2Q14767 1821 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 PLA2G6O60733 806 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 AKR1A1P14550 325 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 SDSP20132 328 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 PDE4AP27815 886 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 COPB2P35606 906 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 OAZ1P54368 228 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 KCNA10Q16322 511 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 CCDC144BQ3MJ40 725 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 ARMCX2Q7L311 632 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 ZNF467Q7Z7K2 595 aaPredicted RBP11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 CHD1LQ86WJ1 897 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 DEFB123Q8N688 67 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 CHST13Q8NET6 341 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 RILPL2Q969X0 211 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 CPVLQ9H3G5 476 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 PRDM5Q9NQX1 630 aaPredicted RBP11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 PDGFCQ9NRA1 345 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 RNF146Q9NTX7 359 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 NEDD4P46934 1319 aa11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 FRMPD2Q68DX3 1309 aaPredicted RBP11.58□□□□□ -0.56
RPRD1B-204ENST00000471511 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 SLC3A2P08195 630 aaKnown RBP11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 ALAS1P13196 640 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 STAT2P52630 851 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 ACLYP53396 1101 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 FAAP100Q0VG06 881 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 BTNL9Q6UXG8 535 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 MSL3Q8N5Y2 521 aaKnown RBP11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 FAM184BQ9ULE4 1060 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 ISY1Q9ULR0 285 aaKnown RBP11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
RPRD1B-204ENST00000471511 MCM3APO60318 1980 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 DUSP11O75319 330 aaKnown RBP11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 CDK7P50613 346 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 BEX3Q00994 111 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 TAPT1Q6NXT6 567 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 RNF180Q86T96 592 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 CHURC1Q8WUH1 139 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 GUCD1Q96NT3 240 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 ZKSCAN3Q9BRR0 538 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 UPF3AQ9H1J1 476 aaKnown RBP11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 RANBP17Q9H2T7 1088 aaKnown RBP11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 RWDD1Q9H446 243 aaPredicted RBP11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 ACAD9Q9H845 621 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 TCP11L1Q9NUJ3 509 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 GRIN2DO15399 1336 aa11.56□□□□□ -0.56
RPRD1B-204ENST00000471511 LCTP09848 1927 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms