RNA–Protein interactions for RNA: ENST00000471157.2

CDKN1C-205, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

TSL 2

Gene CDKN1C, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-205ENST00000471157 CCND3P30281 292 aaPredicted RBP28.94■■■□□ 2.22
CDKN1C-205ENST00000471157 GPATCH4Q5T3I0 446 aaKnown RBP28.94■■■□□ 2.22
CDKN1C-205ENST00000471157 DDX11Q96FC9 970 aa28.94■■■□□ 2.22
CDKN1C-205ENST00000471157 CRISPLD2Q9H0B8 497 aa28.94■■■□□ 2.22
CDKN1C-205ENST00000471157 RANBP17Q9H2T7 1088 aaKnown RBP28.94■■■□□ 2.22
CDKN1C-205ENST00000471157 IGHA2P01877 340 aa28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 SEC23AQ15436 765 aa28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 ZNF792Q3KQV3 632 aa28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 TKFCQ3LXA3 575 aa28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 ACAD9Q9H845 621 aa28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 DIS3Q9Y2L1 958 aaKnown RBP28.93■■■□□ 2.22
CDKN1C-205ENST00000471157 ZNFX1Q9P2E3 1918 aaKnown RBP28.92■■■□□ 2.22
CDKN1C-205ENST00000471157 ERICH2A1L162 156 aa28.92■■■□□ 2.22
CDKN1C-205ENST00000471157 GOLGA8HP0CJ92 632 aa28.92■■■□□ 2.22
CDKN1C-205ENST00000471157 ANKRD35Q8N283 1001 aa28.92■■■□□ 2.22
CDKN1C-205ENST00000471157 RNF146Q9NTX7 359 aa28.92■■■□□ 2.22
CDKN1C-205ENST00000471157 IFIT3O14879 490 aaKnown RBP28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 SLC27A2O14975 620 aa28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 ICAM1P05362 532 aa28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 ALAS1P13196 640 aa28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 SART3Q15020 963 aaKnown RBP28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 CREB3L3Q68CJ9 461 aa28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 CCPG1Q9ULG6 757 aa28.91■■■□□ 2.22
CDKN1C-205ENST00000471157 MKI67P46013 3256 aaKnown RBP28.9■■■□□ 2.22
CDKN1C-205ENST00000471157 FARP2O94887 1054 aaPredicted RBP28.9■■■□□ 2.22
CDKN1C-205ENST00000471157 NECTIN1Q15223 517 aa28.9■■■□□ 2.22
CDKN1C-205ENST00000471157 ASPRV1Q53RT3 343 aa28.9■■■□□ 2.22
CDKN1C-205ENST00000471157 TRERF1Q96PN7 1200 aa28.9■■■□□ 2.22
CDKN1C-205ENST00000471157 TNRC18O15417 2968 aaPredicted RBP28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 DNAJC25-GNG10A0A024R161 153 aa28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 PARP1P09874 1014 aaKnown RBP28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 CYBAP13498 195 aa28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 CNGA1P29973 690 aa28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 CHST3Q7LGC8 479 aa28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 MB21D2Q8IYB1 491 aaPredicted RBP28.89■■■□□ 2.22
CDKN1C-205ENST00000471157 RNF20Q5VTR2 975 aa28.88■■■□□ 2.21
CDKN1C-205ENST00000471157 UBE2Q1Q7Z7E8 422 aa28.88■■■□□ 2.21
CDKN1C-205ENST00000471157 UBA5Q9GZZ9 404 aa28.88■■■□□ 2.21
CDKN1C-205ENST00000471157 PLXNA1Q9UIW2 1896 aa28.88■■■□□ 2.21
CDKN1C-205ENST00000471157 WTAPQ15007 396 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 ANKLE1Q8NAG6 615 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 TRPV1Q8NER1 839 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 TINF2Q9BSI4 451 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 CPVLQ9H3G5 476 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 OGDHLQ9ULD0 1010 aa28.87■■■□□ 2.21
CDKN1C-205ENST00000471157 TAL1P17542 331 aaPredicted RBP28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 ANTXR2P58335 489 aa28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 TMEM67Q5HYA8 995 aa28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 A1CFQ9NQ94 594 aaKnown RBP28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 DDX20Q9UHI6 824 aaKnown RBP28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 PNMA2Q9UL42 364 aa28.86■■■□□ 2.21
CDKN1C-205ENST00000471157 MSCO60682 206 aa28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 MUM1L1Q5H9M0 696 aa28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 PRAMEF19Q5SWL8 479 aa28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 LHX8Q68G74 356 aa28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 MSL3Q8N5Y2 521 aaKnown RBP28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 PFASO15067 1338 aa28.85■■■□□ 2.21
CDKN1C-205ENST00000471157 MCM5P33992 734 aa28.84■■■□□ 2.21
CDKN1C-205ENST00000471157 ZNF467Q7Z7K2 595 aaPredicted RBP28.84■■■□□ 2.21
CDKN1C-205ENST00000471157 SENP2Q9HC62 589 aa28.84■■■□□ 2.21
CDKN1C-205ENST00000471157 NRBP1Q9UHY1 535 aa28.84■■■□□ 2.21
CDKN1C-205ENST00000471157 POTEB2H3BUK9 544 aa28.83■■■□□ 2.21
CDKN1C-205ENST00000471157 PRC1O43663 620 aa28.83■■■□□ 2.21
CDKN1C-205ENST00000471157 IGDCC4Q8TDY8 1250 aa28.83■■■□□ 2.21
CDKN1C-205ENST00000471157 WDR19Q8NEZ3 1342 aa28.83■■■□□ 2.21
CDKN1C-205ENST00000471157 DHX16O60231 1041 aaKnown RBP28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 CDC37Q16543 378 aaPredicted RBP28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 MAMDC4Q6UXC1 1216 aa28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 NSMFQ6X4W1 530 aa28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 ADGRF4Q8IZF3 695 aa28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 PAWRQ96IZ0 340 aaKnown RBP28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 MTA3Q9BTC8 594 aa28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 CNPY2Q9Y2B0 182 aa28.82■■■□□ 2.2
CDKN1C-205ENST00000471157 SYNGAP1Q96PV0 1343 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 SEPT4O43236 478 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 NECAB2Q7Z6G3 386 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 CATIPQ7Z7H3 387 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 STAG2Q8N3U4 1231 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 FAM133AQ8N9E0 248 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 DIS3LQ8TF46 1054 aaKnown RBP28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 HTATIP2Q9BUP3 242 aa28.81■■■□□ 2.2
CDKN1C-205ENST00000471157 PDE4DIPQ5VU43 2346 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 CNTN2Q02246 1040 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 GRM4Q14833 912 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 TMEM87BQ96K49 555 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 FGD4Q96M96 766 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 LY9Q9HBG7 655 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 CYP39A1Q9NYL5 469 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 MAD2L2Q9UI95 211 aa28.8■■■□□ 2.2
CDKN1C-205ENST00000471157 PALM3A6NDB9 673 aaPredicted RBP28.79■■■□□ 2.2
CDKN1C-205ENST00000471157 KLRF2D3W0D1 207 aa28.79■■■□□ 2.2
CDKN1C-205ENST00000471157 NFIBO00712 420 aa28.79■■■□□ 2.2
CDKN1C-205ENST00000471157 JMJD4Q9H9V9 463 aa28.79■■■□□ 2.2
CDKN1C-205ENST00000471157 VAT1LQ9HCJ6 419 aa28.79■■■□□ 2.2
CDKN1C-205ENST00000471157 FRMPD3Q5JV73 1810 aa28.78■■■□□ 2.2
CDKN1C-205ENST00000471157 MNX1P50219 401 aaPredicted RBP28.78■■■□□ 2.2
CDKN1C-205ENST00000471157 TROAPQ12815 778 aa28.78■■■□□ 2.2
CDKN1C-205ENST00000471157 USH1GQ495M9 461 aa28.78■■■□□ 2.2
CDKN1C-205ENST00000471157 ANO1Q5XXA6 986 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms