RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 PPP2R5BQ15173 497 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 UBE2SQ16763 222 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 CCDC96Q2M329 555 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 TOGARAM2Q6ZUX3 1019 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 TEX2Q8IWB9 1127 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 IQUBQ8NA54 791 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 MLKLQ8NB16 471 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 LZTFL1Q9NQ48 299 aa10.65□□□□□ -0.71
TOP3A-203ENST00000469739 FAM237AA0A1B0GTK4 181 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 NRDCO43847 1150 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 URI1O94763 535 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-203ENST00000469739 CHRNA5P30532 468 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
TOP3A-203ENST00000469739 KIAA1551Q9HCM1 1747 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 SOWAHDA6NJG2 315 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 CBFA2T2O43439 604 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 TNNI2P48788 182 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 SARSP49591 514 aaKnown RBP10.64□□□□□ -0.71
TOP3A-203ENST00000469739 GRM4Q14833 912 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 ELF2Q15723 593 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 CCDC178Q5BJE1 867 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 SOGA3Q5TF21 947 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 FAM43BQ6ZT52 329 aaPredicted RBP10.64□□□□□ -0.71
TOP3A-203ENST00000469739 FERMT2Q96AC1 680 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 MTA3Q9BTC8 594 aa10.64□□□□□ -0.71
TOP3A-203ENST00000469739 GPR75-ASB3A0A0A6YYF3 556 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 STXBP3O00186 592 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 NEMFO60524 1076 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
TOP3A-203ENST00000469739 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 BAG1Q99933 345 aaPredicted RBP10.63□□□□□ -0.71
TOP3A-203ENST00000469739 N4BP3O15049 544 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 BBOX1O75936 387 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 RCAN1P53805 252 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 TBCKQ8TEA7 893 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 TRERF1Q96PN7 1200 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 IMPACTQ9P2X3 320 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 SSBP05455 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
TOP3A-203ENST00000469739 PCP11498 1178 aaKnown RBP10.63□□□□□ -0.71
TOP3A-203ENST00000469739 CALML3P27482 149 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 RBL2Q08999 1139 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 SPECC1LQ69YQ0 1117 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 KANK3Q6NY19 840 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 DYMQ7RTS9 669 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 IGSF22Q8N9C0 903 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 CCDC34Q96HJ3 373 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 POLD4Q9HCU8 107 aa10.63□□□□□ -0.71
TOP3A-203ENST00000469739 PPP1R3GB7ZBB8 358 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 MARCH6O60337 910 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 TXLNAP40222 546 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 PRCPP42785 496 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 PMS1P54277 932 aaKnown RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 PPP4CP60510 307 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 IRF5Q13568 498 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 ERCC6LQ2NKX8 1250 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 POTEDQ86YR6 584 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 ENOX1Q8TC92 643 aaKnown RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 NELFBQ8WX92 580 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 RRP36Q96EU6 259 aaKnown RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 NID2Q14112 1375 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 DLEC1Q9Y238 1755 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 PALM3A6NDB9 673 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 GDF11O95390 407 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 TDP2O95551 362 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 TFRCP02786 760 aaKnown RBP10.62□□□□□ -0.71
TOP3A-203ENST00000469739 CASP14P31944 242 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 GNG11P61952 73 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 TC2NQ8N9U0 490 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 RETREG2Q8NC44 543 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 TFR2Q9UP52 801 aa10.62□□□□□ -0.71
TOP3A-203ENST00000469739 POTEMA6NI47 508 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 NKRFO15226 690 aaKnown RBP eCLIP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 FANCGO15287 622 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 RPN1P04843 607 aaKnown RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 ZNF18P17022 549 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 C16orf86Q6ZW13 317 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 TMX4Q9H1E5 349 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PPP1R1BQ9UD71 204 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PDS5AQ29RF7 1337 aaKnown RBP10.61□□□□□ -0.71
TOP3A-203ENST00000469739 IDEP14735 1019 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 IL1R1P14778 569 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PLCG1P19174 1290 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 FAM193AP78312 1265 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 E2F4Q16254 413 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PDXDC2PQ6P474 469 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
TOP3A-203ENST00000469739 PDGFDQ9GZP0 370 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms