RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 MFSD14CQ5VZR4 134 aa17.27■□□□□ 0.36
TMEM39A-205ENST00000468676 TRIB2Q92519 343 aa17.27■□□□□ 0.36
TMEM39A-205ENST00000468676 MAP3K14Q99558 947 aa17.27■□□□□ 0.36
TMEM39A-205ENST00000468676 DIS3Q9Y2L1 958 aaKnown RBP17.27■□□□□ 0.36
TMEM39A-205ENST00000468676 RIPK3Q9Y572 518 aa17.27■□□□□ 0.36
TMEM39A-205ENST00000468676 GOLGA8HP0CJ92 632 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 CCL5P13501 91 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 OLFML2BQ68BL8 750 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 RASEFQ8IZ41 740 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 AGBL1Q96MI9 1066 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 RNF208Q9H0X6 261 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 ACAD9Q9H845 621 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 LY9Q9HBG7 655 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 CCPG1Q9ULG6 757 aa17.26■□□□□ 0.35
TMEM39A-205ENST00000468676 RBBP6Q7Z6E9 1792 aaKnown RBP17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 PALM3A6NDB9 673 aaPredicted RBP17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 COBLO75128 1261 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 DDAH1O94760 285 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 RGS19P49795 217 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 SOX10P56693 466 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 TROAPQ12815 778 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 GRM4Q14833 912 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 NFXL1Q6ZNB6 911 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 NPLOC4Q8TAT6 608 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
TMEM39A-205ENST00000468676 RPTORQ8N122 1335 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 CCDC69A6NI79 296 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 KLRF2D3W0D1 207 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 GJB1P08034 283 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 CALM1P0DP23 149 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 CALM2P0DP24 149 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 CALM3P0DP25 149 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 ALAS1P13196 640 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 PSMA5P28066 241 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 KIF5BP33176 963 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 SNAP25P60880 206 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 MTFR1Q15390 333 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 CCL14Q16627 93 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 ADGRF4Q8IZF3 695 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 HMX1Q9NP08 348 aaPredicted RBP17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 RNF146Q9NTX7 359 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 MAD2L2Q9UI95 211 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 SNX14Q9Y5W7 946 aa17.24■□□□□ 0.35
TMEM39A-205ENST00000468676 PFASO15067 1338 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 PLXNA1Q9UIW2 1896 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 MYCP01106 439 aaPredicted RBP17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 SYNE3Q6ZMZ3 975 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 MSL3Q8N5Y2 521 aaKnown RBP17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 MAML3Q96JK9 1138 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 MAF1Q9H063 256 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 UNC93B1Q9H1C4 597 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 MYH6P13533 1939 aa17.23■□□□□ 0.35
TMEM39A-205ENST00000468676 SMCHD1A6NHR9 2005 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 IGHA2P01877 340 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 GNAQP50148 359 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 CACNB2Q08289 660 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 TRAF1Q13077 416 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 CDC37Q16543 378 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 ZNF467Q7Z7K2 595 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 STAG2Q8N3U4 1231 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 LZTS2Q9BRK4 669 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
TMEM39A-205ENST00000468676 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 PGK2P07205 417 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 GJA8P48165 433 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 NUP133Q8WUM0 1156 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 JMJD4Q9H9V9 463 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.35
TMEM39A-205ENST00000468676 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 SGPL1O95470 568 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 FGD1P98174 961 aa17.2■□□□□ 0.34
TMEM39A-205ENST00000468676 TRIM32Q13049 653 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms