RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 IKQ13123 557 aaPredicted RBP17.62■□□□□ 0.41
MRPL55-225ENST00000465268 CWC27Q6UX04 472 aaKnown RBP17.62■□□□□ 0.41
MRPL55-225ENST00000465268 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 TICAM2Q86XR7 235 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 ANKRD35Q8N283 1001 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 CHST13Q8NET6 341 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 CHURC1Q8WUH1 139 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 ATP11BQ9Y2G3 1177 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 ZMYM6O95789 1325 aa17.62■□□□□ 0.41
MRPL55-225ENST00000465268 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 PLA2G6O60733 806 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 RARBP10826 455 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 TRIM60Q495X7 471 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 MUM1L1Q5H9M0 696 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
MRPL55-225ENST00000465268 A1CFQ9NQ94 594 aaKnown RBP17.61■□□□□ 0.41
MRPL55-225ENST00000465268 RNF146Q9NTX7 359 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 TCP11L1Q9NUJ3 509 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 ZHX1Q9UKY1 873 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-225ENST00000465268 ASTN1O14525 1302 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 NEDD4P46934 1319 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 FRMPD2Q68DX3 1309 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-225ENST00000465268 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 FRMPD3Q5JV73 1810 aa17.61■□□□□ 0.41
MRPL55-225ENST00000465268 SOWAHBA6NEL2 793 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 AKR1A1P14550 325 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 GSPT1P15170 499 aaKnown RBP17.6■□□□□ 0.41
MRPL55-225ENST00000465268 SNX17Q15036 470 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 CCDC96Q2M329 555 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 AKNAD1Q5T1N1 836 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 SH3RF1Q7Z6J0 888 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
MRPL55-225ENST00000465268 FAM133AQ8N9E0 248 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 TRERF1Q96PN7 1200 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 UBE2OQ9C0C9 1292 aaKnown RBP17.6■□□□□ 0.41
MRPL55-225ENST00000465268 KATNBL1Q9H079 304 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 ACAD9Q9H845 621 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.6■□□□□ 0.41
MRPL55-225ENST00000465268 FBXO40Q9UH90 709 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 PHF24Q9UPV7 400 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 CNPY2Q9Y2B0 182 aa17.6■□□□□ 0.41
MRPL55-225ENST00000465268 TOP1P11387 765 aaKnown RBP17.59■□□□□ 0.41
MRPL55-225ENST00000465268 ALAS1P13196 640 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 PTGS1P23219 599 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 ACVR2BQ13705 512 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 PPP4R3BQ5MIZ7 849 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 ARMCX2Q7L311 632 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
MRPL55-225ENST00000465268 DCAF4Q8WV16 495 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 ZKSCAN3Q9BRR0 538 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 GPCPD1Q9NPB8 672 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
MRPL55-225ENST00000465268 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 TRIM43BA6NCK2 446 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 FDX1P10109 184 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 PDHBP11177 359 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 CCSAPQ6IQ19 270 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-225ENST00000465268 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 TDHQ8IZJ6 230 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 KLHDC9Q8NEP7 349 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 TRIM43Q96BQ3 446 aaPredicted RBP17.58■□□□□ 0.4
MRPL55-225ENST00000465268 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
MRPL55-225ENST00000465268 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.4
MRPL55-225ENST00000465268 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-225ENST00000465268 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
MRPL55-225ENST00000465268 ITGB8P26012 769 aa17.57■□□□□ 0.4
MRPL55-225ENST00000465268 SYDE2Q5VT97 1194 aa17.57■□□□□ 0.4
MRPL55-225ENST00000465268 RNF180Q86T96 592 aa17.57■□□□□ 0.4
MRPL55-225ENST00000465268 PDLIM7Q9NR12 457 aa17.57■□□□□ 0.4
MRPL55-225ENST00000465268 A0A1W2PQ45 241 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-225ENST00000465268 A0A1W2PQY0 241 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 ZNF213O14771 459 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 TLE2Q04725 743 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 TKFCQ3LXA3 575 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 TMEM63BQ5T3F8 832 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
MRPL55-225ENST00000465268 CYP39A1Q9NYL5 469 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 CCPG1Q9ULG6 757 aa17.56■□□□□ 0.4
MRPL55-225ENST00000465268 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
MRPL55-225ENST00000465268 CTAGE5O15320 804 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 ICAM1P05362 532 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 GOLGA8HP0CJ92 632 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 SNHG28P0DPA3 235 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 KCNA10Q16322 511 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 C1orf53Q5VUE5 145 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 ABHD16BQ9H3Z7 469 aa17.55■□□□□ 0.4
MRPL55-225ENST00000465268 B4E1Z4 1266 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 NFIBO00712 420 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 KDM4AO75164 1064 aa17.54■□□□□ 0.4
MRPL55-225ENST00000465268 DUSP11O75319 330 aaKnown RBP17.54■□□□□ 0.4
MRPL55-225ENST00000465268 ACLYP53396 1101 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms