RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 DYTNA2CJ06 578 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC85CA6NKD9 419 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GDF9O60383 454 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 RNF8O76064 485 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 F13A1P00488 732 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CYP11B2P19099 503 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SYT1P21579 422 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 EIF4BP23588 611 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 VEGFBP49765 207 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GSDMDP57764 484 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 MCCD1P59942 119 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GOLGA8FQ08AF8 430 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GOLGA8DPQ0D2H9 430 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 NEXNQ0ZGT2 675 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PDIA5Q14554 519 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PRPF40BQ6NWY9 871 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 MIS18BP1Q6P0N0 1132 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TLDC1Q6P9B6 456 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ATF7IPQ6VMQ6 1270 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 C11orf57Q6ZUT1 292 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 DZIP3Q86Y13 1208 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC13Q8IYE1 715 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 EXOC8Q8IYI6 725 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TRIML1Q8N9V2 468 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PNMA1Q8ND90 353 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 RBM41Q96IZ5 413 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 WDR24Q96S15 920 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CENPOQ9BU64 300 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 UTP14AQ9BVJ6 771 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GBP3Q9H0R5 595 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 UNC45AQ9H3U1 944 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 AATFQ9NY61 560 aaKnown RBP eCLIP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PKD2L1Q9P0L9 805 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 MAP10Q9P2G4 905 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SUN2Q9UH99 717 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PGAP2Q9UHJ9 254 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 IQSEC3Q9UPP2 1182 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ATP6V1DQ9Y5K8 247 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PRR36Q9H6K5 1346 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 RPAP1Q9BWH6 1393 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GOLGA6L10A6NI86 522 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 OPLAHO14841 1288 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 MEFVO15553 781 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 AHCYL1O43865 530 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PPFIA3O75145 1194 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 FSBPO95073 299 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ARHGAP25P42331 645 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 VSNL1P62760 191 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SKOR1P84550 965 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM32Q13049 653 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PTPN21Q16825 1174 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 DEFB115Q30KQ5 88 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ARMCX5Q6P1M9 558 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CYB5D1Q6P9G0 228 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 OLFML1Q6UWY5 402 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TTLL7Q6ZT98 887 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 RSRC2Q7L4I2 434 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SDCCAG8Q86SQ7 713 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 MFN1Q8IWA4 741 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF511Q8NB15 262 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 OTUD7AQ8TE49 926 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CCDC12Q8WUD4 166 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 DYDC1Q8WWB3 177 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 STAMBPL1Q96FJ0 436 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 RUFY1Q96T51 708 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 C1QTNF1Q9BXJ1 281 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CAPS2Q9BXY5 557 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 NACA2Q9H009 215 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ZBTB40Q9NUA8 1239 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 HAUS2Q9NVX0 235 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TBC1D7Q9P0N9 293 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 BAIAP2L1Q9UHR4 511 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 PALD1Q9ULE6 856 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 L1RE1Q9UN81 338 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 COL3A1P02461 1466 aaPredicted RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SIAH2O43255 324 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 XBP1P17861 261 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 LMNB1P20700 586 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 FUT4P22083 530 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ALDH1B1P30837 517 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SMTNP53814 917 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SH3BP2P78314 561 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 AKAP17AQ02040 695 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 IFT88Q13099 833 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 CUL4AQ13619 759 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 KARSQ15046 597 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 KBTBD12Q3ZCT8 623 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ESCO1Q5FWF5 840 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 FAM228AQ86W67 206 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 AOPEPQ8N6M6 819 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM58Q8NG06 486 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 TRIM11Q96F44 468 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 FAM81BQ96LP2 452 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 JAKMIP1Q96N16 626 aaKnown RBP4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ALS2CR12Q96Q35 445 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 SLX1AQ9BQ83 275 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 GORASP1Q9BQQ3 440 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ANKZF1Q9H8Y5 726 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 ANO2Q9NQ90 1003 aa4.05□□□□□ -1.76
COL8A1-205ENST00000463753 BATF3Q9NR55 127 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms