RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PGK1P00558 417 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 MAGEA10P43363 369 aaPredicted RBP18.31■□□□□ 0.52
NUP50-213ENST00000461437 NOVP48745 357 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 LRRC41Q15345 812 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 FAM160B2Q86V87 743 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
NUP50-213ENST00000461437 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
NUP50-213ENST00000461437 SOX1O00570 391 aaPredicted RBP18.3■□□□□ 0.52
NUP50-213ENST00000461437 ALAS1P13196 640 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 ADCYAP1R1P41586 468 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 MUM1L1Q5H9M0 696 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 MFSD6Q6ZSS7 791 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 CHURC1Q8WUH1 139 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 GDF15Q99988 308 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 XPNPEP3Q9NQH7 507 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 ATP11BQ9Y2G3 1177 aa18.3■□□□□ 0.52
NUP50-213ENST00000461437 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
NUP50-213ENST00000461437 LAMA3Q16787 3333 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 ADCY6O43306 1168 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 TOP1P11387 765 aaKnown RBP18.29■□□□□ 0.52
NUP50-213ENST00000461437 RTP1P59025 263 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 MDM2Q00987 491 aaPredicted RBP18.29■□□□□ 0.52
NUP50-213ENST00000461437 TTC22Q5TAA0 569 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 ARRDC4Q8NCT1 418 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
NUP50-213ENST00000461437 PURBQ96QR8 312 aaKnown RBP18.29■□□□□ 0.52
NUP50-213ENST00000461437 A1CFQ9NQ94 594 aaKnown RBP18.29■□□□□ 0.52
NUP50-213ENST00000461437 ZNF213O14771 459 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 RARBP10826 455 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 PTGS1P23219 599 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 OAZ1P54368 228 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
NUP50-213ENST00000461437 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 DCAF4Q8WV16 495 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 LRCH3Q96II8 777 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 TRERF1Q96PN7 1200 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.28■□□□□ 0.52
NUP50-213ENST00000461437 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
NUP50-213ENST00000461437 MYADML2A6NDP7 307 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 B4E1Z4 1266 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 KDM4AO75164 1064 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 GOLGA8HP0CJ92 632 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 PDHBP11177 359 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 AKR1A1P14550 325 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 TRIM60Q495X7 471 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 SLC39A5Q6ZMH5 540 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 ARMCX2Q7L311 632 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 FBXO40Q9UH90 709 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 CCPG1Q9ULG6 757 aa18.27■□□□□ 0.52
NUP50-213ENST00000461437 ASTN1O14525 1302 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 SYNGAP1Q96PV0 1343 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 PLA2G6O60733 806 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 SYDE2Q5VT97 1194 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 MAMDC4Q6UXC1 1216 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
NUP50-213ENST00000461437 CCDC144CPQ8IYA2 1237 aa18.26■□□□□ 0.51
NUP50-213ENST00000461437 SYNRGQ9UMZ2 1314 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 HIP1O00291 1037 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 ADAMTS4O75173 837 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 ACVR2BQ13705 512 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 FAM133AQ8N9E0 248 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 ESR2Q92731 530 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 UBE2OQ9C0C9 1292 aaKnown RBP18.25■□□□□ 0.51
NUP50-213ENST00000461437 RANBP17Q9H2T7 1088 aaKnown RBP18.25■□□□□ 0.51
NUP50-213ENST00000461437 RNF41Q9H4P4 317 aaPredicted RBP18.25■□□□□ 0.51
NUP50-213ENST00000461437 PRDM5Q9NQX1 630 aaPredicted RBP18.25■□□□□ 0.51
NUP50-213ENST00000461437 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
NUP50-213ENST00000461437 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.24■□□□□ 0.51
NUP50-213ENST00000461437 FDX1P10109 184 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
NUP50-213ENST00000461437 UBA5Q9GZZ9 404 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 FAM184BQ9ULE4 1060 aa18.24■□□□□ 0.51
NUP50-213ENST00000461437 NFIBO00712 420 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 ICAM1P05362 532 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 PTH1RQ03431 593 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 ZNF543Q08ER8 600 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 TMEM63BQ5T3F8 832 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 RNF180Q86T96 592 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 MSL3Q8N5Y2 521 aaKnown RBP18.23■□□□□ 0.51
NUP50-213ENST00000461437 CYP39A1Q9NYL5 469 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 PHF24Q9UPV7 400 aa18.23■□□□□ 0.51
NUP50-213ENST00000461437 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
NUP50-213ENST00000461437 A0A1W2PQ45 241 aaPredicted RBP18.22■□□□□ 0.51
NUP50-213ENST00000461437 A0A1W2PQY0 241 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms