RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 KCNA3P22001 575 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 CDC27P30260 824 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 GDF6Q6KF10 455 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 PRR5LQ6MZQ0 368 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 KIF6Q6ZMV9 814 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 BNC2Q6ZN30 1099 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 CCDC84Q86UT8 332 aaPredicted RBP10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 SULF2Q8IWU5 870 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 PLBD2Q8NHP8 589 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
ECHDC1-212ENST00000461239 ADCY9O60503 1353 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 STK10O94804 968 aaKnown RBP10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 GPTP24298 496 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 APOBRQ0VD83 1088 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 TCIRG1Q13488 830 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 COL9A2Q14055 689 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 SUSD4Q5VX71 490 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 C20orf204Q6ZNR8 217 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 SLITRK4Q8IW52 837 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 GOLGA6L1Q8N7Z2 621 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 LRRC3Q9BY71 257 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 CYP8B1Q9UNU6 501 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 KIF13BQ9NQT8 1826 aa10.18□□□□□ -0.78
ECHDC1-212ENST00000461239 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 FAM221AA4D161 298 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 SOX1O00570 391 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 RGS9O75916 674 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 IKBKEQ14164 716 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 PDZD3Q86UT5 571 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 CACTIN-AS1Q8N1I8 211 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 SYNE4Q8N205 404 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 GRIN3AQ8TCU5 1115 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 NUDT8Q8WV74 236 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 GATAD2BQ8WXI9 593 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 SSH1Q8WYL5 1049 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 GAL3ST3Q96A11 431 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 MIR1-1HGQ9H1L0 117 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 GDF2Q9UK05 429 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 ZNF652Q9Y2D9 606 aa10.17□□□□□ -0.78
ECHDC1-212ENST00000461239 A0A0G2JLW4 131 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 PI4KAP2A4QPH2 592 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 FAM177BA6PVY3 158 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 H3BRJ5 948 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 NTSR2O95665 410 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 EPXP11678 715 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 DPEP1P16444 411 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 ARNTP27540 789 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 CHRNA5P30532 468 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 SEPT6Q14141 434 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 NLRP10Q86W26 655 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 PI4KAP1Q8N8J0 262 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 FBXO27Q8NI29 283 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 NKD1Q969G9 470 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 STK31Q9BXU1 1019 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 ZNF408Q9H9D4 720 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 STRIP2Q9ULQ0 834 aa10.16□□□□□ -0.78
ECHDC1-212ENST00000461239 ABCC12Q96J65 1359 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 ANKRD31Q8N7Z5 1873 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 ALBP02768 609 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 SSBP05455 408 aaKnown RBP eCLIP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 IGKV5-2P06315 115 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 ALAS2P22557 587 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 CCDC144BQ3MJ40 725 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 LLGL2Q6P1M3 1020 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 KSR2Q6VAB6 950 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 C1orf229Q6ZS94 237 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 NBPF5PQ86XG9 351 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 METTL22Q9BUU2 404 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 CHMP4AQ9BY43 222 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 SOX17Q9H6I2 414 aaPredicted RBP10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 ARFGEF2Q9Y6D5 1785 aa10.15□□□□□ -0.78
ECHDC1-212ENST00000461239 N4BP2Q86UW6 1770 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 KLRG2A4D1S0 409 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 YBX3P16989 372 aaKnown RBP eCLIP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 RARSP54136 660 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 TGFB2P61812 414 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 KRT76Q01546 638 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 SRSF11Q05519 484 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 NFX1Q12986 1120 aaKnown RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 LRRC14Q15048 493 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 CNBD1Q8NA66 436 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 MYD88Q99836 296 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 EMILIN2Q9BXX0 1053 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 JPH1Q9HDC5 661 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 ANKRD36CQ5JPF3 1778 aa10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 IBTKQ9P2D0 1353 aaPredicted RBP10.14□□□□□ -0.79
ECHDC1-212ENST00000461239 TLR3O15455 904 aaKnown RBP10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 CILPO75339 1184 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 CT47B1P0C2W7 299 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms