RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
SCAMP4-205ENST00000452128 TKFCQ3LXA3 575 aa18.91■□□□□ 0.62
SCAMP4-205ENST00000452128 MFSD14CQ5VZR4 134 aa18.91■□□□□ 0.62
SCAMP4-205ENST00000452128 MTMR7Q9Y216 660 aa18.91■□□□□ 0.62
SCAMP4-205ENST00000452128 FRMPD2Q68DX3 1309 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-205ENST00000452128 CDC45O75419 566 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 ICAM1P05362 532 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 KCTD2Q14681 263 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 CCDC96Q2M329 555 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 GPATCH4Q5T3I0 446 aaKnown RBP18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 CREB3L3Q68CJ9 461 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 MAMDC4Q6UXC1 1216 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 KIAA1211Q6ZU35 1233 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 FBXO40Q9UH90 709 aa18.9■□□□□ 0.62
SCAMP4-205ENST00000452128 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 SLC35G1Q2M3R5 365 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 MUM1L1Q5H9M0 696 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 FAM133AQ8N9E0 248 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 NCOA7Q8NI08 942 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 KCNB2Q92953 911 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 KAT14Q9H8E8 782 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 SLC5A4Q9NY91 659 aa18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-205ENST00000452128 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TFRCP02786 760 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TAL1P17542 331 aaPredicted RBP18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TROAPQ12815 778 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TRDNQ13061 729 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 PRAMEF19Q5SWL8 479 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 CLEC4DQ8WXI8 215 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 TINF2Q9BSI4 451 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 MTA3Q9BTC8 594 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 CPVLQ9H3G5 476 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 A1CFQ9NQ94 594 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 NRBP1Q9UHY1 535 aa18.88■□□□□ 0.61
SCAMP4-205ENST00000452128 PALM3A6NDB9 673 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 ASTN1O14525 1302 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 IKQ13123 557 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 IFIT1BQ5T764 474 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 CCDC174Q6PII3 467 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 CHST3Q7LGC8 479 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 RASEFQ8IZ41 740 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 MSL3Q8N5Y2 521 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 MTMR8Q96EF0 704 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 ACAD9Q9H845 621 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 ANO2Q9NQ90 1003 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 GPHNQ9NQX3 736 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 RNF146Q9NTX7 359 aa18.87■□□□□ 0.61
SCAMP4-205ENST00000452128 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 SOWAHBA6NEL2 793 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 FARP2O94887 1054 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 ZNF865P0CJ78 1059 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 CNTN2Q02246 1040 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 ASPRV1Q53RT3 343 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 DIS3LQ8TF46 1054 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 KATNBL1Q9H079 304 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 DDX20Q9UHI6 824 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 CTDP1Q9Y5B0 961 aaPredicted RBP18.86■□□□□ 0.61
SCAMP4-205ENST00000452128 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 SEPT4O43236 478 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 COL6A1P12109 1028 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 ALAS1P13196 640 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 DDX11Q96FC9 970 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 JMJD4Q9H9V9 463 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 LY9Q9HBG7 655 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 HOMER2Q9NSB8 354 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 CYP39A1Q9NYL5 469 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 CCPG1Q9ULG6 757 aa18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 ISY1Q9ULR0 285 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-205ENST00000452128 SLC4A3P48751 1232 aa18.84■□□□□ 0.61
SCAMP4-205ENST00000452128 EXOSC10Q01780 885 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-205ENST00000452128 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-205ENST00000452128 ANKRD35Q8N283 1001 aa18.84■□□□□ 0.61
SCAMP4-205ENST00000452128 PAWRQ96IZ0 340 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-205ENST00000452128 NFIBO00712 420 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 MSCO60682 206 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 PARP1P09874 1014 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 GRM4Q14833 912 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 RGS22Q8NE09 1264 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 MORC4Q8TE76 937 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 PNMA2Q9UL42 364 aa18.83■□□□□ 0.6
SCAMP4-205ENST00000452128 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 SH2B2O14492 632 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 PRC1O43663 620 aa18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 CYTH3O43739 400 aa18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 WTAPQ15007 396 aa18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 TMEM67Q5HYA8 995 aa18.82■□□□□ 0.6
SCAMP4-205ENST00000452128 MAP3K14Q99558 947 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms