RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 IGHA2P01877 340 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 TFRCP02786 760 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 GOLGA8HP0CJ92 632 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 CYP2C19P33261 490 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 IFIT1BQ5T764 474 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 OLFML2BQ68BL8 750 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 CHST13Q8NET6 341 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 SHISA4Q96DD7 197 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 RBBP6Q7Z6E9 1792 aaKnown RBP11.86□□□□□ -0.51
CTDSPL-207ENST00000447745 ALAS1P13196 640 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 CCND3P30281 292 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 ANTXR2P58335 489 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 ZNF792Q3KQV3 632 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 TKFCQ3LXA3 575 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 ANKRD35Q8N283 1001 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 TRERF1Q96PN7 1200 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 SENP2Q9HC62 589 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 RNF146Q9NTX7 359 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 FBXO40Q9UH90 709 aa11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 DIS3Q9Y2L1 958 aaKnown RBP11.85□□□□□ -0.51
CTDSPL-207ENST00000447745 DNAJC25-GNG10A0A024R161 153 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 ERICH2A1L162 156 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 ICAM1P05362 532 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 CAPN2P17655 700 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 WTAPQ15007 396 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 ASPRV1Q53RT3 343 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 TMEM67Q5HYA8 995 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 TRPV1Q8NER1 839 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 ACAD9Q9H845 621 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 MKI67P46013 3256 aaKnown RBP11.84□□□□□ -0.51
CTDSPL-207ENST00000447745 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.51
CTDSPL-207ENST00000447745 PRC1O43663 620 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 TAL1P17542 331 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 CNGA1P29973 690 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 MCM5P33992 734 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 LHX8Q68G74 356 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 STAG2Q8N3U4 1231 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
CTDSPL-207ENST00000447745 PALM3A6NDB9 673 aaPredicted RBP11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 CYBAP13498 195 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 CNTN2Q02246 1040 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 JMJD4Q9H9V9 463 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 A1CFQ9NQ94 594 aaKnown RBP11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 MAD2L2Q9UI95 211 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 PNMA2Q9UL42 364 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 OGDHLQ9ULD0 1010 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
CTDSPL-207ENST00000447745 KLRF2D3W0D1 207 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 FARP2O94887 1054 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 TROAPQ12815 778 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 GRM4Q14833 912 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 NSMFQ6X4W1 530 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 TMTC2Q8N394 836 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 FAM133AQ8N9E0 248 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 TMEM87BQ96K49 555 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 LRRC2Q9BYS8 371 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 LY9Q9HBG7 655 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 CYP39A1Q9NYL5 469 aa11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 DDX20Q9UHI6 824 aaKnown RBP11.81□□□□□ -0.52
CTDSPL-207ENST00000447745 SOWAHBA6NEL2 793 aa11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 NFIBO00712 420 aa11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 SH2B2O14492 632 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 SEPT4O43236 478 aa11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 MSCO60682 206 aa11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 SNAI1O95863 264 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 ZNF865P0CJ78 1059 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 BAATQ14032 418 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
CTDSPL-207ENST00000447745 MAMDC4Q6UXC1 1216 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms