RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ALAS1P13196 640 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 CNTN2Q02246 1040 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 PTH1RQ03431 593 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 IMMTQ16891 758 aaKnown RBP24.4■■□□□ 1.5
VIL1-204ENST00000440053 FGD4Q96M96 766 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 TRERF1Q96PN7 1200 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 ZSWIM5Q9P217 1185 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 CEP290O15078 2479 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 ALPK3Q96L96 1907 aa24.4■■□□□ 1.5
VIL1-204ENST00000440053 PDHBP11177 359 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 SYN1P17600 705 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 MUM1L1Q5H9M0 696 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 RNF146Q9NTX7 359 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 RBM27Q9P2N5 1060 aaKnown RBP24.39■■□□□ 1.5
VIL1-204ENST00000440053 FBXO40Q9UH90 709 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 CTNNA3Q9UI47 895 aa24.39■■□□□ 1.5
VIL1-204ENST00000440053 BTNL9Q6UXG8 535 aa24.38■■□□□ 1.49
VIL1-204ENST00000440053 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.38■■□□□ 1.49
VIL1-204ENST00000440053 LENG1Q96BZ8 264 aaPredicted RBP24.38■■□□□ 1.49
VIL1-204ENST00000440053 SLC34A2O95436 690 aa24.38■■□□□ 1.49
VIL1-204ENST00000440053 GOLGA8HP0CJ92 632 aa24.38■■□□□ 1.49
VIL1-204ENST00000440053 ATN1P54259 1190 aaPredicted RBP24.38■■□□□ 1.49
VIL1-204ENST00000440053 SYDE2Q5VT97 1194 aa24.38■■□□□ 1.49
VIL1-204ENST00000440053 ACAD9Q9H845 621 aa24.38■■□□□ 1.49
VIL1-204ENST00000440053 DDX49Q9Y6V7 483 aaKnown RBP24.38■■□□□ 1.49
VIL1-204ENST00000440053 DNAH12Q6ZR08 3092 aa24.37■■□□□ 1.49
VIL1-204ENST00000440053 MAMDC4Q6UXC1 1216 aa24.37■■□□□ 1.49
VIL1-204ENST00000440053 RANBP17Q9H2T7 1088 aaKnown RBP24.37■■□□□ 1.49
VIL1-204ENST00000440053 CPVLQ9H3G5 476 aa24.37■■□□□ 1.49
VIL1-204ENST00000440053 A1CFQ9NQ94 594 aaKnown RBP24.37■■□□□ 1.49
VIL1-204ENST00000440053 DNM1LO00429 736 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 PGK1P00558 417 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 ZNF543Q08ER8 600 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 LRRC41Q15345 812 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 DGKHQ86XP1 1220 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 ARRDC4Q8NCT1 418 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 PURBQ96QR8 312 aaKnown RBP24.36■■□□□ 1.49
VIL1-204ENST00000440053 ZSCAN10Q96SZ4 725 aaPredicted RBP24.36■■□□□ 1.49
VIL1-204ENST00000440053 NRBP1Q9UHY1 535 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 CCPG1Q9ULG6 757 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 CNPY2Q9Y2B0 182 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 TAF6LQ9Y6J9 622 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 PLXNA1Q9UIW2 1896 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 FRMPD3Q5JV73 1810 aa24.36■■□□□ 1.49
VIL1-204ENST00000440053 SOWAHBA6NEL2 793 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 SNHG28P0DPA3 235 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 IQCA1Q86XH1 822 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 RUFY2Q8WXA3 655 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 UBA5Q9GZZ9 404 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 PRO3102Q9H379 93 aa24.35■■□□□ 1.49
VIL1-204ENST00000440053 RANBP2P49792 3224 aaKnown RBP24.35■■□□□ 1.49
VIL1-204ENST00000440053 POTEB2H3BUK9 544 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 ICAM1P05362 532 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 TKFCQ3LXA3 575 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 CYB5R4Q7L1T6 521 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 ENAHQ8N8S7 591 aaPredicted RBP24.34■■□□□ 1.49
VIL1-204ENST00000440053 FAM133AQ8N9E0 248 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 FERMT2Q96AC1 680 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 XPNPEP3Q9NQH7 507 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.34■■□□□ 1.49
VIL1-204ENST00000440053 ZHX1Q9UKY1 873 aaPredicted RBP24.34■■□□□ 1.49
VIL1-204ENST00000440053 SYNGAP1Q96PV0 1343 aa24.34■■□□□ 1.49
VIL1-204ENST00000440053 SMCHD1A6NHR9 2005 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 CYP21A2P08686 494 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 RARBP10826 455 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 ADCYAP1R1P41586 468 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 IRX5P78411 483 aaPredicted RBP24.33■■□□□ 1.49
VIL1-204ENST00000440053 ZNF467Q7Z7K2 595 aaPredicted RBP24.33■■□□□ 1.49
VIL1-204ENST00000440053 CCDC144CPQ8IYA2 1237 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 MSL3Q8N5Y2 521 aaKnown RBP24.33■■□□□ 1.49
VIL1-204ENST00000440053 PNMA1Q8ND90 353 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 ANKS1AQ92625 1134 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 KRT23Q9C075 422 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 RAD50Q92878 1312 aa24.33■■□□□ 1.49
VIL1-204ENST00000440053 KBTBD13C9JR72 458 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 SGSM2O43147 1006 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 AKR1A1P14550 325 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 ACVR2BQ13705 512 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 NSMFQ6X4W1 530 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 ARMCX2Q7L311 632 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 KAT14Q9H8E8 782 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 ASTN1O14525 1302 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 TNKSO95271 1327 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 ADCY6O43306 1168 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 CYP39A1Q9NYL5 469 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 FAM184BQ9ULE4 1060 aa24.32■■□□□ 1.48
VIL1-204ENST00000440053 FXR1P51114 621 aaKnown RBP eCLIP24.31■■□□□ 1.48
VIL1-204ENST00000440053 CCDC178Q5BJE1 867 aa24.31■■□□□ 1.48
VIL1-204ENST00000440053 SLC39A5Q6ZMH5 540 aa24.31■■□□□ 1.48
VIL1-204ENST00000440053 CNNM2Q9H8M5 875 aa24.31■■□□□ 1.48
VIL1-204ENST00000440053 LAMA4Q16363 1823 aa24.31■■□□□ 1.48
VIL1-204ENST00000440053 NFIBO00712 420 aa24.3■■□□□ 1.48
VIL1-204ENST00000440053 BAATQ14032 418 aaPredicted RBP24.3■■□□□ 1.48
VIL1-204ENST00000440053 KATNBL1Q9H079 304 aa24.3■■□□□ 1.48
VIL1-204ENST00000440053 RTP1P59025 263 aa24.29■■□□□ 1.48
VIL1-204ENST00000440053 CCDC144BQ3MJ40 725 aa24.29■■□□□ 1.48
VIL1-204ENST00000440053 CLEC4DQ8WXI8 215 aa24.29■■□□□ 1.48
VIL1-204ENST00000440053 GDF15Q99988 308 aa24.29■■□□□ 1.48
VIL1-204ENST00000440053 ABHD16BQ9H3Z7 469 aa24.29■■□□□ 1.48
VIL1-204ENST00000440053 U3KPZ7 1027 aaPredicted RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms