RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MYL10Q9BUA6 226 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 ZNF236Q9UL36 1845 aa22.73■■□□□ 1.23
SEMA3B-206ENST00000439487 PALM3A6NDB9 673 aaPredicted RBP22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 ELNP15502 786 aa22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 GRK4P32298 578 aa22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 COPB2P35606 906 aa22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 MAP2K5Q13163 448 aa22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 GRB14Q14449 540 aa22.72■■□□□ 1.23
SEMA3B-206ENST00000439487 KLRF2D3W0D1 207 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 STRNO43815 780 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 EIF5BO60841 1220 aaKnown RBP22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 TAL1P17542 331 aaPredicted RBP22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 CASTP20810 708 aaKnown RBP22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 PSMA5P28066 241 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 RGS2P41220 211 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 RAB11FIP4Q86YS3 637 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 ADGRF4Q8IZF3 695 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 VAT1LQ9HCJ6 419 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 HOMER2Q9NSB8 354 aa22.71■■□□□ 1.23
SEMA3B-206ENST00000439487 CCDC85CA6NKD9 419 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 DDAH1O94760 285 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 FCER1AP12319 257 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 ADORA2AP29274 412 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 SLAIN1Q8ND83 568 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 MMP19Q99542 508 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 CCPG1Q9ULG6 757 aa22.7■■□□□ 1.22
SEMA3B-206ENST00000439487 MCM3APO60318 1980 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 DHX16O60231 1041 aaKnown RBP22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 ICAM1P05362 532 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 ALAS1P13196 640 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 RXRAP19793 462 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 RPS6KB1P23443 525 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 Q6ZUG5 572 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 NBPF11Q86T75 865 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 NPLOC4Q8TAT6 608 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 ARMC5Q96C12 935 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 BIN2Q9UBW5 565 aaPredicted RBP22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 SLC12A7Q9Y666 1083 aa22.69■■□□□ 1.22
SEMA3B-206ENST00000439487 COBLO75128 1261 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 MYCP01106 439 aaPredicted RBP22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 XRCC5P13010 732 aaKnown RBP22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 FGD1P98174 961 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 KCTD2Q14681 263 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 CDC37Q16543 378 aaPredicted RBP22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 CCL14Q16627 93 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 TKFCQ3LXA3 575 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 DPP9Q86TI2 863 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 CCDC144CPQ8IYA2 1237 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 ABRAQ8N0Z2 381 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 CHST13Q8NET6 341 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 TRERF1Q96PN7 1200 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 MAP3K14Q99558 947 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 APBA2Q99767 749 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 JMJD4Q9H9V9 463 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 ZSWIM6Q9HCJ5 1215 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 RNF146Q9NTX7 359 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 BRPF3Q9ULD4 1205 aa22.68■■□□□ 1.22
SEMA3B-206ENST00000439487 SLC35G1Q2M3R5 365 aa22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 RUFY3Q7L099 469 aa22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 CTCFLQ8NI51 663 aaPredicted RBP22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 TRIB2Q92519 343 aa22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 ZNF333Q96JL9 665 aa22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 FBXO40Q9UH90 709 aa22.67■■□□□ 1.22
SEMA3B-206ENST00000439487 PGK2P07205 417 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 CALM1P0DP23 149 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 CALM2P0DP24 149 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 CALM3P0DP25 149 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 MUM1L1Q5H9M0 696 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 SYNE3Q6ZMZ3 975 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 MICU3Q86XE3 530 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 TM6SF1Q9BZW5 370 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 ACAD9Q9H845 621 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 LCTP09848 1927 aa22.66■■□□□ 1.22
SEMA3B-206ENST00000439487 KLF18A0A0U1RQI7 1052 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 INHAP05111 366 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 HOXC6P09630 235 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 KIF5BP33176 963 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 APOBRQ0VD83 1088 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 TRIM32Q13049 653 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 QRICH1Q2TAL8 776 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 APOA5Q6Q788 366 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 ANKRD35Q8N283 1001 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 BRF1Q92994 677 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 DDX11Q96FC9 970 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 UPF3BQ9BZI7 483 aaKnown RBP22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 RIOX1Q9H6W3 641 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 FLRT1Q9NZU1 646 aa22.65■■□□□ 1.22
SEMA3B-206ENST00000439487 CYTH3O43739 400 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 HMGCRP04035 888 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 ANAPC15P60006 121 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 UBXN2AP68543 259 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 MTFR1Q15390 333 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 USH1GQ495M9 461 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 FANCBQ8NB91 859 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 SLC5A4Q9NY91 659 aa22.64■■□□□ 1.21
SEMA3B-206ENST00000439487 NAP1L2Q9ULW6 460 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms