RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 HOMER2Q9NSB8 354 aa25.16■■□□□ 1.62
SDHAP3-201ENST00000436493 TAF6LQ9Y6J9 622 aa25.16■■□□□ 1.62
SDHAP3-201ENST00000436493 IFIT3O14879 490 aaKnown RBP25.15■■□□□ 1.62
SDHAP3-201ENST00000436493 SART3Q15020 963 aaKnown RBP25.15■■□□□ 1.62
SDHAP3-201ENST00000436493 MAML3Q96JK9 1138 aa25.15■■□□□ 1.62
SDHAP3-201ENST00000436493 DIS3Q9Y2L1 958 aaKnown RBP25.15■■□□□ 1.62
SDHAP3-201ENST00000436493 ZNF536O15090 1300 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 ALAS1P13196 640 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 CCND3P30281 292 aaPredicted RBP25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 STOX1Q6ZVD7 989 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 CRISPLD2Q9H0B8 497 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 RANBP17Q9H2T7 1088 aaKnown RBP25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 ACAD9Q9H845 621 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 RNF146Q9NTX7 359 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 CCPG1Q9ULG6 757 aa25.14■■□□□ 1.62
SDHAP3-201ENST00000436493 SLC27A2O14975 620 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 GOLGA8HP0CJ92 632 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 CNGA1P29973 690 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 SEC23AQ15436 765 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 ZNF792Q3KQV3 632 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 RNF20Q5VTR2 975 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 CREB3L3Q68CJ9 461 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 TRERF1Q96PN7 1200 aa25.13■■□□□ 1.61
SDHAP3-201ENST00000436493 FARP2O94887 1054 aaPredicted RBP25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 ICAM1P05362 532 aa25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 PARP1P09874 1014 aaKnown RBP25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 NECTIN1Q15223 517 aa25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 ASPRV1Q53RT3 343 aa25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 PNMA2Q9UL42 364 aa25.12■■□□□ 1.61
SDHAP3-201ENST00000436493 IGHA2P01877 340 aa25.11■■□□□ 1.61
SDHAP3-201ENST00000436493 WTAPQ15007 396 aa25.11■■□□□ 1.61
SDHAP3-201ENST00000436493 CHST3Q7LGC8 479 aa25.11■■□□□ 1.61
SDHAP3-201ENST00000436493 UBA5Q9GZZ9 404 aa25.11■■□□□ 1.61
SDHAP3-201ENST00000436493 TMEM67Q5HYA8 995 aa25.1■■□□□ 1.61
SDHAP3-201ENST00000436493 MB21D2Q8IYB1 491 aaPredicted RBP25.1■■□□□ 1.61
SDHAP3-201ENST00000436493 TINF2Q9BSI4 451 aa25.1■■□□□ 1.61
SDHAP3-201ENST00000436493 DNAJC25-GNG10A0A024R161 153 aa25.09■■□□□ 1.61
SDHAP3-201ENST00000436493 MSCO60682 206 aa25.09■■□□□ 1.61
SDHAP3-201ENST00000436493 CYBAP13498 195 aa25.09■■□□□ 1.61
SDHAP3-201ENST00000436493 ANKLE1Q8NAG6 615 aa25.09■■□□□ 1.61
SDHAP3-201ENST00000436493 OGDHLQ9ULD0 1010 aa25.09■■□□□ 1.61
SDHAP3-201ENST00000436493 PDE4DIPQ5VU43 2346 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 POTEB2H3BUK9 544 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 DHX16O60231 1041 aaKnown RBP25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 MCM5P33992 734 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 MSL3Q8N5Y2 521 aaKnown RBP25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 TRPV1Q8NER1 839 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 CPVLQ9H3G5 476 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 DDX20Q9UHI6 824 aaKnown RBP25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 PLXNA1Q9UIW2 1896 aa25.08■■□□□ 1.61
SDHAP3-201ENST00000436493 PFASO15067 1338 aa25.08■■□□□ 1.6
SDHAP3-201ENST00000436493 PRC1O43663 620 aa25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 ANTXR2P58335 489 aa25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 PRAMEF19Q5SWL8 479 aa25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 LHX8Q68G74 356 aa25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 A1CFQ9NQ94 594 aaKnown RBP25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 NRBP1Q9UHY1 535 aa25.07■■□□□ 1.6
SDHAP3-201ENST00000436493 MUM1L1Q5H9M0 696 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 NSMFQ6X4W1 530 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 UBE2Q1Q7Z7E8 422 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 CATIPQ7Z7H3 387 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 ZNF467Q7Z7K2 595 aaPredicted RBP25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 ADGRF4Q8IZF3 695 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 IGDCC4Q8TDY8 1250 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 MTA3Q9BTC8 594 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 HTATIP2Q9BUP3 242 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 CNPY2Q9Y2B0 182 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 WDR19Q8NEZ3 1342 aa25.06■■□□□ 1.6
SDHAP3-201ENST00000436493 SEPT4O43236 478 aa25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 NECAB2Q7Z6G3 386 aa25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 PAWRQ96IZ0 340 aaKnown RBP25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 TMEM87BQ96K49 555 aa25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 VAT1LQ9HCJ6 419 aa25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 SYNGAP1Q96PV0 1343 aa25.05■■□□□ 1.6
SDHAP3-201ENST00000436493 KLRF2D3W0D1 207 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 TAL1P17542 331 aaPredicted RBP25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 CNTN2Q02246 1040 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 CDC37Q16543 378 aaPredicted RBP25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 MAMDC4Q6UXC1 1216 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 TMTC2Q8N394 836 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 STAG2Q8N3U4 1231 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 SENP2Q9HC62 589 aa25.04■■□□□ 1.6
SDHAP3-201ENST00000436493 REC8O95072 547 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 GRM4Q14833 912 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 NFXL1Q6ZNB6 911 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 FAM133AQ8N9E0 248 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 CYP39A1Q9NYL5 469 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 MAD2L2Q9UI95 211 aa25.03■■□□□ 1.6
SDHAP3-201ENST00000436493 BRCA2P51587 3418 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 PALM3A6NDB9 673 aaPredicted RBP25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 KRT32Q14532 448 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 USH1GQ495M9 461 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 DIS3LQ8TF46 1054 aaKnown RBP25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 DPF3Q92784 378 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 NEK1Q96PY6 1258 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 JMJD4Q9H9V9 463 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 LY9Q9HBG7 655 aa25.02■■□□□ 1.6
SDHAP3-201ENST00000436493 CCDC69A6NI79 296 aa25.01■■□□□ 1.59
SDHAP3-201ENST00000436493 NFIBO00712 420 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms