RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 KIFC2Q96AC6 838 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 GMCL1Q96IK5 515 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SEC62Q99442 399 aaKnown RBP13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ELP1O95163 1332 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MUC3AQ02505 3323 aa13.05□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PLA2G6O60733 806 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FDX1P10109 184 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 NOVP48745 357 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CDK7P50613 346 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 GJA9P57773 515 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PPARAQ07869 468 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 KCNA10Q16322 511 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 COL25A1Q9BXS0 654 aaPredicted RBP13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ERC2O15083 957 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TSPY3P0CV98 308 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TSPY8P0CW00 308 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 BMP3P12645 472 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 RAG1P15918 1043 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 STAT2P52630 851 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 FPGSQ05932 587 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 PDE4BQ07343 736 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 CCDC144CPQ8IYA2 1237 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 NACAP1Q9BZK3 213 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 A1CFQ9NQ94 594 aaKnown RBP13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 TMEM39AQ9NV64 488 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 ASTN1O14525 1302 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 MROH7Q68CQ1 1323 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
SPTLC1P4-201ENST00000435997 DCDC2CA8MYV0 355 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 TIMP1P01033 207 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 APPP05067 770 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 FAM126BQ8IXS8 530 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ANKRD35Q8N283 1001 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 NAPBQ9H115 298 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ACAD9Q9H845 621 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 LRRC37A2A6NM11 1700 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 PRUNE2Q8WUY3 3088 aa13.02□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 TMEM232C9JQI7 657 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ASGR1P07306 291 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SLC3A2P08195 630 aaKnown RBP13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 FGRP09769 529 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 C6orf222P0C671 652 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MX1P20591 662 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SLC1A4P43007 532 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 TFAP4Q01664 338 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MFSD5Q6N075 450 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 FSD1Q9BTV5 496 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 RNF146Q9NTX7 359 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ANAPC4Q9UJX5 808 aa13.01□□□□□ -0.33
SPTLC1P4-201ENST00000435997 C11orf97A0A1B0GVM6 126 aaPredicted RBP13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SOWAHBA6NEL2 793 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ARVCFO00192 962 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 DNAJB2P25686 324 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 TKFCQ3LXA3 575 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 C16orf59Q7L2K0 433 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SLC43A3Q8NBI5 491 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MYLIPQ8WY64 445 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 BUD13Q9BRD0 619 aaKnown RBP eCLIP13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SPC25Q9HBM1 224 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 CTDP1Q9Y5B0 961 aaPredicted RBP13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MYH4Q9Y623 1939 aa13□□□□□ -0.33
SPTLC1P4-201ENST00000435997 NMT2O60551 498 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 CD4P01730 458 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 VPS53Q5VIR6 699 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 CCDC129Q6ZRS4 1044 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
SPTLC1P4-201ENST00000435997 ZMYM6O95789 1325 aa12.98□□□□□ -0.33
SPTLC1P4-201ENST00000435997 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms