RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 OLFML2BQ68BL8 750 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 CREB3L3Q68CJ9 461 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 LHX8Q68G74 356 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 KIAA1211Q6ZU35 1233 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
ATG4B-210ENST00000428861 FGD4Q96M96 766 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 UBA5Q9GZZ9 404 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-210ENST00000428861 HOMER2Q9NSB8 354 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 SMCHD1A6NHR9 2005 aa12.61□□□□□ -0.39
ATG4B-210ENST00000428861 DNAJC25-GNG10A0A024R161 153 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 CYBAP13498 195 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 COPB2P35606 906 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 KCTD2Q14681 263 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 SLC35G1Q2M3R5 365 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
ATG4B-210ENST00000428861 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 KAT14Q9H8E8 782 aa12.6□□□□□ -0.39
ATG4B-210ENST00000428861 CTDP1Q9Y5B0 961 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-210ENST00000428861 ZNFX1Q9P2E3 1918 aaKnown RBP12.6□□□□□ -0.39
ATG4B-210ENST00000428861 TFRCP02786 760 aaKnown RBP12.59□□□□□ -0.39
ATG4B-210ENST00000428861 ICAM1P05362 532 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 FDX1P10109 184 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 ALAS1P13196 640 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 TRDNQ13061 729 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
ATG4B-210ENST00000428861 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 CHST13Q8NET6 341 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 IGDCC4Q8TDY8 1250 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 PURBQ96QR8 312 aaKnown RBP12.59□□□□□ -0.39
ATG4B-210ENST00000428861 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 OGDHLQ9ULD0 1010 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
ATG4B-210ENST00000428861 ASTN1O14525 1302 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 PDE4DIPQ5VU43 2346 aa12.59□□□□□ -0.39
ATG4B-210ENST00000428861 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
ATG4B-210ENST00000428861 CNTN2Q02246 1040 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 ANO1Q5XXA6 986 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
ATG4B-210ENST00000428861 TINF2Q9BSI4 451 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 ACAD9Q9H845 621 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
ATG4B-210ENST00000428861 MAD2L2Q9UI95 211 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
ATG4B-210ENST00000428861 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
ATG4B-210ENST00000428861 SOWAHBA6NEL2 793 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 NFIBO00712 420 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 FARP2O94887 1054 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-210ENST00000428861 SNAI1O95863 264 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-210ENST00000428861 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 GPATCH4Q5T3I0 446 aaKnown RBP12.57□□□□□ -0.4
ATG4B-210ENST00000428861 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 ANKRD35Q8N283 1001 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 CLEC4DQ8WXI8 215 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
ATG4B-210ENST00000428861 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 SLC5A4Q9NY91 659 aa12.57□□□□□ -0.4
ATG4B-210ENST00000428861 DDX20Q9UHI6 824 aaKnown RBP12.57□□□□□ -0.4
ATG4B-210ENST00000428861 PALM3A6NDB9 673 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-210ENST00000428861 PRC1O43663 620 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
ATG4B-210ENST00000428861 ZNF865P0CJ78 1059 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-210ENST00000428861 CNGA1P29973 690 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 TROAPQ12815 778 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 GRM4Q14833 912 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 WTAPQ15007 396 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 TKFCQ3LXA3 575 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 ASPRV1Q53RT3 343 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 TMEM67Q5HYA8 995 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 MYL10Q9BUA6 226 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 JMJD4Q9H9V9 463 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 VAT1LQ9HCJ6 419 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 FBXO40Q9UH90 709 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 PLXNA1Q9UIW2 1896 aa12.56□□□□□ -0.4
ATG4B-210ENST00000428861 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-210ENST00000428861 BAATQ14032 418 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-210ENST00000428861 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-210ENST00000428861 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
ATG4B-210ENST00000428861 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
ATG4B-210ENST00000428861 LENG1Q96BZ8 264 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-210ENST00000428861 KATNBL1Q9H079 304 aa12.55□□□□□ -0.4
ATG4B-210ENST00000428861 CYP39A1Q9NYL5 469 aa12.55□□□□□ -0.4
ATG4B-210ENST00000428861 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 SEPT4O43236 478 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 ADCY6O43306 1168 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 CYTH3O43739 400 aa12.54□□□□□ -0.4
ATG4B-210ENST00000428861 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-210ENST00000428861 MCM5P33992 734 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms