RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 SLC4A3P48751 1232 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 BLOC1S2Q6QNY1 142 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 SGMS1Q86VZ5 419 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 ZNF333Q96JL9 665 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 AGBL1Q96MI9 1066 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 MMP19Q99542 508 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 MAP3K14Q99558 947 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 UBA5Q9GZZ9 404 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 CPVLQ9H3G5 476 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 FBXO40Q9UH90 709 aa29.33■■■□□ 2.29
HERPUD2-205ENST00000427455 PALM3A6NDB9 673 aaPredicted RBP29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 HOXC6P09630 235 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 KCTD2Q14681 263 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 TKFCQ3LXA3 575 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 TRMT44Q8IYL2 757 aaKnown RBP29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 STAG2Q8N3U4 1231 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 CHST13Q8NET6 341 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 TCEANC2Q96MN5 208 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 PNMA2Q9UL42 364 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 CCPG1Q9ULG6 757 aa29.32■■■□□ 2.28
HERPUD2-205ENST00000427455 CCDC85CA6NKD9 419 aa29.31■■■□□ 2.28
HERPUD2-205ENST00000427455 KLRF2D3W0D1 207 aa29.31■■■□□ 2.28
HERPUD2-205ENST00000427455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.31■■■□□ 2.28
HERPUD2-205ENST00000427455 NUP133Q8WUM0 1156 aa29.31■■■□□ 2.28
HERPUD2-205ENST00000427455 HMGCRP04035 888 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 DPP9Q86TI2 863 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 ADGRF4Q8IZF3 695 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 MYL10Q9BUA6 226 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 HOMER2Q9NSB8 354 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 RNF146Q9NTX7 359 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 BIN2Q9UBW5 565 aaPredicted RBP29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 SLC12A7Q9Y666 1083 aa29.3■■■□□ 2.28
HERPUD2-205ENST00000427455 DHX16O60231 1041 aaKnown RBP29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 CALM1P0DP23 149 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 CALM2P0DP24 149 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 CALM3P0DP25 149 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 CASTP20810 708 aaKnown RBP29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 RPS6KB1P23443 525 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 UBXN2AP68543 259 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 C8orf34Q49A92 452 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 CTCFLQ8NI51 663 aaPredicted RBP29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 TRIB2Q92519 343 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 ACAD9Q9H845 621 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 SLC5A4Q9NY91 659 aa29.29■■■□□ 2.28
HERPUD2-205ENST00000427455 INHAP05111 366 aa29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 ALAS1P13196 640 aa29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 CPA1P15085 419 aa29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 KIF5BP33176 963 aa29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 CDC37Q16543 378 aaPredicted RBP29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 TRERF1Q96PN7 1200 aa29.28■■■□□ 2.28
HERPUD2-205ENST00000427455 FGD1P98174 961 aa29.27■■■□□ 2.28
HERPUD2-205ENST00000427455 TM6SF1Q9BZW5 370 aa29.27■■■□□ 2.28
HERPUD2-205ENST00000427455 JMJD4Q9H9V9 463 aa29.27■■■□□ 2.28
HERPUD2-205ENST00000427455 ZNFX1Q9P2E3 1918 aaKnown RBP29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 COBLO75128 1261 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 ANAPC15P60006 121 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 CCL14Q16627 93 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 APOA5Q6Q788 366 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 SYNE3Q6ZMZ3 975 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 NPLOC4Q8TAT6 608 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 ZSWIM6Q9HCJ5 1215 aa29.26■■■□□ 2.27
HERPUD2-205ENST00000427455 SEC24BO95487 1268 aa29.25■■■□□ 2.27
HERPUD2-205ENST00000427455 MICU3Q86XE3 530 aa29.25■■■□□ 2.27
HERPUD2-205ENST00000427455 ANKRD35Q8N283 1001 aa29.25■■■□□ 2.27
HERPUD2-205ENST00000427455 FBXL16Q8N461 479 aa29.25■■■□□ 2.27
HERPUD2-205ENST00000427455 VAT1LQ9HCJ6 419 aa29.25■■■□□ 2.27
HERPUD2-205ENST00000427455 RBBP6Q7Z6E9 1792 aaKnown RBP29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 PGK2P07205 417 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 TAL1P17542 331 aaPredicted RBP29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 RXRAP19793 462 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 QRICH1Q2TAL8 776 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 Q6ZUG5 572 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 RUFY3Q7L099 469 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 DDX11Q96FC9 970 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 RIOX1Q9H6W3 641 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 PLXNA1Q9UIW2 1896 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 CYP46A1Q9Y6A2 500 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 MYH6P13533 1939 aa29.24■■■□□ 2.27
HERPUD2-205ENST00000427455 GNAQP50148 359 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 MUM1L1Q5H9M0 696 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 OLFML2BQ68BL8 750 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 MTMR8Q96EF0 704 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 LZTS2Q9BRK4 669 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 FLRT1Q9NZU1 646 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 BRPF3Q9ULD4 1205 aa29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 DIS3Q9Y2L1 958 aaKnown RBP29.23■■■□□ 2.27
HERPUD2-205ENST00000427455 PFASO15067 1338 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 DNAJC25-GNG10A0A024R161 153 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 KLF18A0A0U1RQI7 1052 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 CAPN15O75808 1086 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 MYCP01106 439 aaPredicted RBP29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 RCAN1P53805 252 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 MTFR1Q15390 333 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 SLC35G1Q2M3R5 365 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 ZNF792Q3KQV3 632 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 RAB11FIP4Q86YS3 637 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 MAML3Q96JK9 1138 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 SPZ1Q9BXG8 430 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 AGXT2Q9BYV1 514 aa29.22■■■□□ 2.27
HERPUD2-205ENST00000427455 A1CFQ9NQ94 594 aaKnown RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms