RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LMOD1P29536 600 aaPredicted RBP27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 PRPHP41219 470 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 SEPT2Q15019 361 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 DLGAP5Q15398 846 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 LETM2Q2VYF4 491 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 PPP1R18Q6NYC8 613 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 OGFOD1Q8N543 542 aa27.98■■■□□ 2.07
DNMT3A-206ENST00000406659 COL2A1P02458 1487 aaPredicted RBP27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 SPDYE2BA6NHP3 402 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 CCNT1O60563 726 aaKnown RBP27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 SPDYE6P0CI01 402 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 SLC16A2P36021 539 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 E2F4Q16254 413 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 SHROOM1Q2M3G4 852 aaPredicted RBP27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 GMLQ99445 158 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 IFNKQ9P0W0 207 aa27.97■■■□□ 2.07
DNMT3A-206ENST00000406659 ICA1Q05084 483 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 SLFN13Q68D06 897 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 TBCKQ8TEA7 893 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 CSRNP1Q96S65 589 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 MYO1BO43795 1136 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 GDF11O95390 407 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 DPYDQ12882 1025 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 RBM26Q5T8P6 1007 aaKnown RBP27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 NIM1KQ8IY84 436 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 TMEM260Q9NX78 707 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 PIM2Q9P1W9 311 aa27.96■■■□□ 2.07
DNMT3A-206ENST00000406659 TCP10L2B9ZVM9 353 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 USP17L10C9JJH3 530 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 ZBTB5O15062 677 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 SLC1A4P43007 532 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 FANCCQ00597 558 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 CCDC144BQ3MJ40 725 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 GSDMAQ96QA5 445 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 XPO4Q9C0E2 1151 aaKnown RBP27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 ZNRF3Q9ULT6 936 aa27.95■■■□□ 2.06
DNMT3A-206ENST00000406659 OR52Z1P0C646 297 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 TGFB2P61812 414 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 ORC2Q13416 577 aaPredicted RBP27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 NOLC1Q14978 699 aaKnown RBP eCLIP27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 PDXDC2PQ6P474 469 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 MTMR8Q96EF0 704 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 RIC8AQ9NPQ8 531 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 ZNF70Q9UC06 446 aaPredicted RBP27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 PYCARDQ9ULZ3 195 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 CLRN2A0PK11 232 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 NEMFO60524 1076 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 HSD3B7Q9H2F3 369 aa27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 ZBTB12Q9Y330 459 aaPredicted RBP27.94■■■□□ 2.06
DNMT3A-206ENST00000406659 PPP1R11O60927 126 aaPredicted RBP27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 CDC25AP30304 524 aa27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 UBA7P41226 1012 aa27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 SIAH1Q8IUQ4 282 aa27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 KIAA1524Q8TCG1 905 aa27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 HERC5Q9UII4 1024 aaKnown RBP27.93■■■□□ 2.06
DNMT3A-206ENST00000406659 KIF13BQ9NQT8 1826 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 ZBTB7AO95365 584 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 CASP1P29466 404 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 STAT6P42226 847 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 KARSQ15046 597 aaKnown RBP27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 CT47A1Q5JQC4 288 aaPredicted RBP27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 RASSF8Q8NHQ8 419 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 FANCLQ9NW38 375 aa27.92■■■□□ 2.06
DNMT3A-206ENST00000406659 CBFA2T2O43439 604 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 GTPBP6O43824 516 aaPredicted RBP27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 GH2P01242 217 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 ATP1A3P13637 1013 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 FILIP1Q7Z7B0 1213 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 ENOX1Q8TC92 643 aaKnown RBP27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 FAM151AQ8WW52 585 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 STAMQ92783 540 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 CUL5Q93034 780 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 COL4A5P29400 1685 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 SERPINC1P01008 464 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 ERCC5P28715 1186 aaPredicted RBP27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 MRPL12P52815 198 aaKnown RBP27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 LRMPQ12912 555 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 RRAGBQ5VZM2 374 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 GMCL1P1Q8NEA9 526 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 AGBL3Q8NEM8 1001 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 CACTINQ8WUQ7 758 aaKnown RBP27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 AK8Q96MA6 479 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 CCSER1Q9C0I3 900 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 DISC1Q9NRI5 854 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 IMPACTQ9P2X3 320 aa27.91■■■□□ 2.06
DNMT3A-206ENST00000406659 F5H6K3 240 aa27.9■■■□□ 2.06
DNMT3A-206ENST00000406659 POLD1P28340 1107 aa27.9■■■□□ 2.06
DNMT3A-206ENST00000406659 KLRC3Q07444 240 aa27.9■■■□□ 2.06
DNMT3A-206ENST00000406659 C17orf53Q8N3J3 647 aaPredicted RBP27.9■■■□□ 2.06
DNMT3A-206ENST00000406659 PP2D1A8MPX8 630 aa27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 FMR1Q06787 632 aaKnown RBP eCLIP27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 SPDYE2Q495Y8 402 aa27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 DALRD3Q5D0E6 543 aaKnown RBP27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 NAP1L5Q96NT1 182 aaPredicted RBP27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 SPTLC3Q9NUV7 552 aa27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 ATF5Q9Y2D1 282 aaPredicted RBP27.89■■■□□ 2.06
DNMT3A-206ENST00000406659 UBASH3AP57075 661 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 GSDMDP57764 484 aa27.88■■■□□ 2.05
DNMT3A-206ENST00000406659 LRRC8AQ8IWT6 810 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms