RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CTAGE5O15320 804 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 SLC25A27O95847 323 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 POLR3DP05423 398 aaPredicted RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 ACRP10323 421 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 AKR1A1P14550 325 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 AKR1B1P15121 316 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 CSF2RAP15509 400 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 AAMPQ13685 434 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 TMEM179Q6ZVK1 233 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 ZNF365Q70YC5 407 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 MARVELD3Q96A59 401 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 DYNLL2Q96FJ2 89 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 GAS2L1Q99501 681 aaPredicted RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 MMP19Q99542 508 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 TMEM121BQ9BXQ6 578 aaPredicted RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 RWDD1Q9H446 243 aaPredicted RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 VCPKMTQ9H867 229 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 STARD7Q9NQZ5 370 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 MCM9Q9NXL9 1143 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 YBX2Q9Y2T7 364 aaKnown RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 MAGEB6P1A0A0J9YX57 407 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 MOXD2PA6NHM9 499 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 VWA5AO00534 786 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 WDR46O15213 610 aaKnown RBP7.45□□□□□ -1.22
RPA3-204ENST00000406109 CD4P01730 458 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 CHRM1P11229 460 aaPredicted RBP7.45□□□□□ -1.22
RPA3-204ENST00000406109 PDE6AP16499 860 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 CST5P28325 142 aaPredicted RBP7.45□□□□□ -1.22
RPA3-204ENST00000406109 STAT3P40763 770 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 PSEN1P49768 467 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 TFF2Q03403 129 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 PPIGQ13427 754 aaKnown RBP eCLIP7.45□□□□□ -1.22
RPA3-204ENST00000406109 ANKRD45Q5TZF3 282 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 TMED8Q6PL24 325 aaPredicted RBP7.45□□□□□ -1.22
RPA3-204ENST00000406109 MAMDC4Q6UXC1 1216 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 NUP133Q8WUM0 1156 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 SDR42E1Q8WUS8 393 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 HERVK_113Q902F9 699 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 FAM122AQ96E09 287 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 FGD4Q96M96 766 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 RIPK3Q9Y572 518 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 ELP1O95163 1332 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 SYNGAP1Q96PV0 1343 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 TET1Q8NFU7 2136 aa7.45□□□□□ -1.22
RPA3-204ENST00000406109 CYP2D7A0A087X1C5 515 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 ARVCFO00192 962 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 PRKAB2O43741 272 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 DUSP11O75319 330 aaKnown RBP7.44□□□□□ -1.22
RPA3-204ENST00000406109 IGHDP01880 384 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 ASGR1P07306 291 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 EEF2P13639 858 aaKnown RBP7.44□□□□□ -1.22
RPA3-204ENST00000406109 CYP2C18P33260 490 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 NKX3-2P78367 333 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 ICA1Q05084 483 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 HDAC1Q13547 482 aaPredicted RBP7.44□□□□□ -1.22
RPA3-204ENST00000406109 KCTD2Q14681 263 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 SLFNL1Q499Z3 407 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 SLC9C2Q5TAH2 1124 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 CCDC129Q6ZRS4 1044 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 LCORLQ8N3X6 602 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 MSL3Q8N5Y2 521 aaKnown RBP7.44□□□□□ -1.22
RPA3-204ENST00000406109 SLC43A3Q8NBI5 491 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.44□□□□□ -1.22
RPA3-204ENST00000406109 KATNBL1Q9H079 304 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 UPF3AQ9H1J1 476 aaKnown RBP7.44□□□□□ -1.22
RPA3-204ENST00000406109 NKX2-4Q9H2Z4 354 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 IL23AQ9NPF7 189 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 FAM184BQ9ULE4 1060 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 PPP1R9AQ9ULJ8 1098 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
RPA3-204ENST00000406109 DNAH14Q0VDD8 3507 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 MYO7AQ13402 2215 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 GREB1LQ9C091 1923 aaPredicted RBP7.43□□□□□ -1.22
RPA3-204ENST00000406109 CHGBP05060 677 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 MYOGP15173 224 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 IGFBP4P22692 258 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 CDK8P49336 464 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 KCNQ1P51787 676 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 RABGGTBP53611 331 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 GJA9P57773 515 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 ACVR2BQ13705 512 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 CCDC144BQ3MJ40 725 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 B4GALNT3Q6L9W6 998 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 PSRC1Q6PGN9 363 aaPredicted RBP7.43□□□□□ -1.22
RPA3-204ENST00000406109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.43□□□□□ -1.22
RPA3-204ENST00000406109 TMEM199Q8N511 208 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 GLT1D1Q96MS3 346 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 DNAJC2Q99543 621 aaKnown RBP7.43□□□□□ -1.22
RPA3-204ENST00000406109 CRNKL1Q9BZJ0 848 aaKnown RBP7.43□□□□□ -1.22
RPA3-204ENST00000406109 PPP1R12CQ9BZL4 782 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 BOLA2Q9H3K6 86 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 EPHX3Q9H6B9 360 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 SWAP70Q9UH65 585 aa7.43□□□□□ -1.22
RPA3-204ENST00000406109 CNPY2Q9Y2B0 182 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms