RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
ESRRA-202ENST00000405666 KRT25Q7Z3Z0 450 aa23.29■■□□□ 1.32
ESRRA-202ENST00000405666 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
ESRRA-202ENST00000405666 RTKN2Q8IZC4 609 aa23.29■■□□□ 1.32
ESRRA-202ENST00000405666 KIAA1524Q8TCG1 905 aa23.29■■□□□ 1.32
ESRRA-202ENST00000405666 PRMT6Q96LA8 375 aaPredicted RBP23.29■■□□□ 1.32
ESRRA-202ENST00000405666 BCCIPQ9P287 314 aaKnown RBP eCLIP23.29■■□□□ 1.32
ESRRA-202ENST00000405666 SOGA3Q5TF21 947 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 CCDC34Q96HJ3 373 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 DPEP1P16444 411 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 LMOD1P29536 600 aaPredicted RBP23.28■■□□□ 1.32
ESRRA-202ENST00000405666 GTF2F1P35269 517 aaKnown RBP eCLIP23.28■■□□□ 1.324e-8■■□□□ 11.4
ESRRA-202ENST00000405666 AFMP43652 599 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 IRX5P78411 483 aaPredicted RBP23.28■■□□□ 1.32
ESRRA-202ENST00000405666 CERKLQ49MI3 558 aaPredicted RBP23.28■■□□□ 1.32
ESRRA-202ENST00000405666 JMJD4Q9H9V9 463 aa23.28■■□□□ 1.32
ESRRA-202ENST00000405666 CGNQ9P2M7 1197 aaKnown RBP23.28■■□□□ 1.32
ESRRA-202ENST00000405666 PSME4Q14997 1843 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 ATP2B2Q01814 1243 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 NONOQ15233 471 aaKnown RBP eCLIP23.27■■□□□ 1.325e-7■■■■□ 24.3
ESRRA-202ENST00000405666 GPATCH4Q5T3I0 446 aaKnown RBP23.27■■□□□ 1.32
ESRRA-202ENST00000405666 TTBK2Q6IQ55 1244 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 C17orf53Q8N3J3 647 aaPredicted RBP23.27■■□□□ 1.32
ESRRA-202ENST00000405666 MLKLQ8NB16 471 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 SLC16A10Q8TF71 515 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 MYH4Q9Y623 1939 aa23.27■■□□□ 1.32
ESRRA-202ENST00000405666 ENTPD3O75355 529 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 LRMPQ12912 555 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 NOLC1Q14978 699 aaKnown RBP eCLIP23.26■■□□□ 1.31
ESRRA-202ENST00000405666 ADGRF4Q8IZF3 695 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 MKL1Q969V6 931 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 ATP1A3P13637 1013 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 MMP14P50281 582 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 DPYDQ12882 1025 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 IQUBQ8NA54 791 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 COA7Q96BR5 231 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 XPO4Q9C0E2 1151 aaKnown RBP23.26■■□□□ 1.31
ESRRA-202ENST00000405666 SPTLC3Q9NUV7 552 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 IFNKQ9P0W0 207 aa23.26■■□□□ 1.31
ESRRA-202ENST00000405666 COL4A5P29400 1685 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 LAD1O00515 517 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 SMC2O95347 1197 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 PDXDC2PQ6P474 469 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 RSBN1LQ6PCB5 846 aaPredicted RBP23.25■■□□□ 1.31
ESRRA-202ENST00000405666 DTHD1Q6ZMT9 781 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 REXO1Q8N1G1 1221 aaKnown RBP23.25■■□□□ 1.31
ESRRA-202ENST00000405666 CACTINQ8WUQ7 758 aaKnown RBP23.25■■□□□ 1.31
ESRRA-202ENST00000405666 PYM1Q9BRP8 204 aaKnown RBP23.25■■□□□ 1.31
ESRRA-202ENST00000405666 KANSL2Q9H9L4 492 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 NYAP2Q9P242 653 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 EEF2P13639 858 aaKnown RBP23.25■■□□□ 1.31
ESRRA-202ENST00000405666 CASP1P29466 404 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 SIAH1Q8IUQ4 282 aa23.25■■□□□ 1.31
ESRRA-202ENST00000405666 PPP1R11O60927 126 aaPredicted RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 CDC25AP30304 524 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 PRPHP41219 470 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 KCTD1Q719H9 257 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 MTMR8Q96EF0 704 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 GMLQ99445 158 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 MTRQ99707 1265 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 ZNF277Q9NRM2 450 aaPredicted RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 BIN2Q9UBW5 565 aaPredicted RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 COL2A1P02458 1487 aaPredicted RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 VIL1P09327 827 aaKnown RBP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 FANCCQ00597 558 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 FMR1Q06787 632 aaKnown RBP eCLIP23.24■■□□□ 1.31
ESRRA-202ENST00000405666 NEK8Q86SG6 692 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 FANCLQ9NW38 375 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 DACH1Q9UI36 760 aa23.24■■□□□ 1.31
ESRRA-202ENST00000405666 PSMD14O00487 310 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 RAD17O75943 681 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 SLC16A2P36021 539 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 CCDC96Q2M329 555 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 LETM2Q2VYF4 491 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 LARGE2Q8N3Y3 721 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 TBCKQ8TEA7 893 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 PRIMPOLQ96LW4 560 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 GSDMAQ96QA5 445 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 TRIM34Q9BYJ4 488 aa23.23■■□□□ 1.31
ESRRA-202ENST00000405666 SEPT2Q15019 361 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 JAKMIP3Q5VZ66 844 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 TMEM179Q6ZVK1 233 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 LRRC8AQ8IWT6 810 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 MED15Q96RN5 788 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 TMEM260Q9NX78 707 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 SPDYE2BA6NHP3 402 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 CCNT1O60563 726 aaKnown RBP23.22■■□□□ 1.31
ESRRA-202ENST00000405666 SPDYE6P0CI01 402 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 FILIP1Q7Z7B0 1213 aa23.22■■□□□ 1.31
ESRRA-202ENST00000405666 USP17L10C9JJH3 530 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 MYO1BO43795 1136 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 TXLNAP40222 546 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 ADCY7P51828 1080 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 ARID5BQ14865 1188 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 PPP1R18Q6NYC8 613 aa23.21■■□□□ 1.31
ESRRA-202ENST00000405666 ENOX1Q8TC92 643 aaKnown RBP23.21■■□□□ 1.31
ESRRA-202ENST00000405666 STAMQ92783 540 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms