RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 FRMPD2Q68DX3 1309 aaPredicted RBP16.69■□□□□ 0.26
HDDC2-202ENST00000398153 IGHA2P01877 340 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 HSPA4P34932 840 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 ANTXR2P58335 489 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 MTFR1Q15390 333 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 MSL3Q8N5Y2 521 aaKnown RBP16.68■□□□□ 0.26
HDDC2-202ENST00000398153 NEK1Q96PY6 1258 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 ACAD9Q9H845 621 aa16.68■□□□□ 0.26
HDDC2-202ENST00000398153 PAK6Q9NQU5 681 aaPredicted RBP16.68■□□□□ 0.26
HDDC2-202ENST00000398153 PRC1O43663 620 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 COBLO75128 1261 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 SLC16A2P36021 539 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 GJA8P48165 433 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 RASGRP2Q7LDG7 609 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 CATIPQ7Z7H3 387 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
HDDC2-202ENST00000398153 DNAJC25-GNG10A0A024R161 153 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
HDDC2-202ENST00000398153 TROAPQ12815 778 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 ZNF792Q3KQV3 632 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 DHX32Q7L7V1 743 aaKnown RBP16.66■□□□□ 0.26
HDDC2-202ENST00000398153 ZNF467Q7Z7K2 595 aaPredicted RBP16.66■□□□□ 0.26
HDDC2-202ENST00000398153 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 NPLOC4Q8TAT6 608 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 CHMP4CQ96CF2 233 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 AGBL1Q96MI9 1066 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 UNC93B1Q9H1C4 597 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 LY9Q9HBG7 655 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 CCPG1Q9ULG6 757 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 PFASO15067 1338 aa16.66■□□□□ 0.26
HDDC2-202ENST00000398153 POTEFA5A3E0 1075 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
HDDC2-202ENST00000398153 MSCO60682 206 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 DDAH1O94760 285 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 SGPL1O95470 568 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CALM1P0DP23 149 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CALM2P0DP24 149 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CALM3P0DP25 149 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
HDDC2-202ENST00000398153 TRAF1Q13077 416 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 GRM4Q14833 912 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CCL14Q16627 93 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CCDC174Q6PII3 467 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.266e-7■■■■□ 21.6
HDDC2-202ENST00000398153 RNF146Q9NTX7 359 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
HDDC2-202ENST00000398153 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
HDDC2-202ENST00000398153 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 KLRF2D3W0D1 207 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 SH2B2O14492 632 aaPredicted RBP16.64■□□□□ 0.25
HDDC2-202ENST00000398153 ALAS1P13196 640 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 KIF5BP33176 963 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 SLC4A3P48751 1232 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
HDDC2-202ENST00000398153 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
HDDC2-202ENST00000398153 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 RASEFQ8IZ41 740 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 ADGRF4Q8IZF3 695 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 U2AF1L4Q8WU68 220 aaKnown RBP16.64■□□□□ 0.25
HDDC2-202ENST00000398153 FLRT1Q9NZU1 646 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 PLXNA1Q9UIW2 1896 aa16.64■□□□□ 0.25
HDDC2-202ENST00000398153 LOC102724159A0A0B4J2E5 919 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
HDDC2-202ENST00000398153 PGK2P07205 417 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 PSMA5P28066 241 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 GNAQP50148 359 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 PWP2Q15269 919 aaKnown RBP16.63■□□□□ 0.25
HDDC2-202ENST00000398153 NFXL1Q6ZNB6 911 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 RGS22Q8NE09 1264 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
HDDC2-202ENST00000398153 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 TINF2Q9BSI4 451 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 CRISPLD2Q9H0B8 497 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 SYNGAP1Q96PV0 1343 aa16.63■□□□□ 0.25
HDDC2-202ENST00000398153 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
HDDC2-202ENST00000398153 TRIM32Q13049 653 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 FBXL16Q8N461 479 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 MTMR8Q96EF0 704 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 JMJD4Q9H9V9 463 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
HDDC2-202ENST00000398153 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
HDDC2-202ENST00000398153 POTEB2H3BUK9 544 aa16.61■□□□□ 0.25
HDDC2-202ENST00000398153 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms