RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 KRT86O43790 486 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
CLIC4-201ENST00000374379 PRPF4BQ13523 1007 aaKnown RBP15.15■□□□□ 0.02
CLIC4-201ENST00000374379 PRKG1Q13976 671 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 ENOX1Q8TC92 643 aaKnown RBP15.15■□□□□ 0.02
CLIC4-201ENST00000374379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.027e-6■■■■■ 74.5
CLIC4-201ENST00000374379 B4DLN1 442 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 RAPGEF1Q13905 1077 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 GOLGA1Q92805 767 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 PLEKHA4Q9H4M7 779 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 GTF2F1P35269 517 aaKnown RBP eCLIP15.15■□□□□ 0.022e-13■■■■■ 29.2
CLIC4-201ENST00000374379 COPB1P53618 953 aaKnown RBP15.15■□□□□ 0.02
CLIC4-201ENST00000374379 ARMCX5Q6P1M9 558 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 CACNA1FO60840 1977 aa15.15■□□□□ 0.02
CLIC4-201ENST00000374379 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
CLIC4-201ENST00000374379 TROAPQ12815 778 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 ANKRD13CQ8N6S4 541 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 GDAP1L1Q96MZ0 367 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 PTPROQ16827 1216 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 TYW1BQ6NUM6 668 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 DDX25Q9UHL0 483 aaKnown RBP15.14■□□□□ 0.01
CLIC4-201ENST00000374379 FAM13AO94988 1023 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 TOB1P50616 345 aaPredicted RBP15.14■□□□□ 0.01
CLIC4-201ENST00000374379 BARGINQ6ZT62 677 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 ACRBPQ8NEB7 543 aa15.14■□□□□ 0.01
CLIC4-201ENST00000374379 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
CLIC4-201ENST00000374379 POTEMA6NI47 508 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 TTLL1O95922 423 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
CLIC4-201ENST00000374379 ERCC5P28715 1186 aaPredicted RBP15.13■□□□□ 0.01
CLIC4-201ENST00000374379 TRAPPC10P48553 1259 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 TXNRD1Q16881 649 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 RIC1Q4ADV7 1423 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 ALS2CR12Q96Q35 445 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 PTPAQ15257 358 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 DLGAP5Q15398 846 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 KRT83P78385 493 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 RRAGAQ7L523 313 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 KIAA1024Q9UPX6 916 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 MEIS1O00470 390 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 AKR1B1P15121 316 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 ODF2Q5BJF6 829 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 EARS2Q5JPH6 523 aaKnown RBP15.13■□□□□ 0.01
CLIC4-201ENST00000374379 TMTC1Q8IUR5 882 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 RDH13Q8NBN7 331 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 HPS3Q969F9 1004 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
CLIC4-201ENST00000374379 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L15C9J2P7 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L13C9JLJ4 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L11C9JVI0 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L18D6R9N7 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L22D6RA61 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L17D6RBQ6 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L19D6RCP7 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L20D6RJB6 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 FOXP2O15409 715 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L24Q0WX57 530 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 TBC1D16Q8TBP0 767 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 KMT5BQ4FZB7 885 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 GPBP1Q86WP2 473 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 TPH2Q8IWU9 490 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 ENC1O14682 589 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 ORC4O43929 436 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 HSPA1LP34931 641 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 SSR1P43307 286 aaKnown RBP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 HLTFQ14527 1009 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLIC4-201ENST00000374379 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 PHF20Q9BVI0 1012 aa15.12■□□□□ 0.01
CLIC4-201ENST00000374379 PPARDQ03181 441 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 IQCEQ6IPM2 695 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 TTBK2Q6IQ55 1244 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 VPS36Q86VN1 386 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 TUBGCP2Q9BSJ2 902 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 CHD2O14647 1828 aaKnown RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 HOXA13P31271 388 aaPredicted RBP15.11■□□□□ 0.01
CLIC4-201ENST00000374379 MTF1Q14872 753 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 KRT31Q15323 416 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 GJA10Q969M2 543 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 H7C1D1 291 aa15.11■□□□□ 0.01
CLIC4-201ENST00000374379 TACC1O75410 805 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms