RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 TRERF1Q96PN7 1200 aa24■■□□□ 1.43
NPDC1-202ENST00000371601 CPVLQ9H3G5 476 aa24■■□□□ 1.43
NPDC1-202ENST00000371601 SENP2Q9HC62 589 aa24■■□□□ 1.43
NPDC1-202ENST00000371601 FBXO40Q9UH90 709 aa24■■□□□ 1.43
NPDC1-202ENST00000371601 CCPG1Q9ULG6 757 aa24■■□□□ 1.43
NPDC1-202ENST00000371601 ZNF536O15090 1300 aa23.99■■□□□ 1.43
NPDC1-202ENST00000371601 RPTORQ8N122 1335 aa23.99■■□□□ 1.43
NPDC1-202ENST00000371601 GJB1P08034 283 aa23.99■■□□□ 1.43
NPDC1-202ENST00000371601 ANTXR2P58335 489 aa23.99■■□□□ 1.43
NPDC1-202ENST00000371601 DEFB118Q96PH6 123 aa23.99■■□□□ 1.43
NPDC1-202ENST00000371601 TFRCP02786 760 aaKnown RBP23.98■■□□□ 1.43
NPDC1-202ENST00000371601 CYP2C19P33261 490 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 MLLT1Q03111 559 aaPredicted RBP23.98■■□□□ 1.43
NPDC1-202ENST00000371601 ASPRV1Q53RT3 343 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 NFXL1Q6ZNB6 911 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 CATIPQ7Z7H3 387 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 RASEFQ8IZ41 740 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 NEK1Q96PY6 1258 aa23.98■■□□□ 1.43
NPDC1-202ENST00000371601 RANBP17Q9H2T7 1088 aaKnown RBP23.98■■□□□ 1.43
NPDC1-202ENST00000371601 LAMA4Q16363 1823 aa23.97■■□□□ 1.43
NPDC1-202ENST00000371601 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.97■■□□□ 1.434e-9■■■■■ 29.6
NPDC1-202ENST00000371601 GPHNQ9NQX3 736 aaPredicted RBP23.97■■□□□ 1.43
NPDC1-202ENST00000371601 RNF146Q9NTX7 359 aa23.97■■□□□ 1.43
NPDC1-202ENST00000371601 ICAM1P05362 532 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 CNGA1P29973 690 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 TKFCQ3LXA3 575 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 ADGRF4Q8IZF3 695 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 TMTC2Q8N394 836 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 U2AF1L4Q8WU68 220 aaKnown RBP23.96■■□□□ 1.43
NPDC1-202ENST00000371601 NUP133Q8WUM0 1156 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 LRRC2Q9BYS8 371 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 ACAD9Q9H845 621 aa23.96■■□□□ 1.43
NPDC1-202ENST00000371601 KLRF2D3W0D1 207 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 SGPL1O95470 568 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 GJA8P48165 433 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 COL9A3Q14050 684 aaPredicted RBP23.95■■□□□ 1.42
NPDC1-202ENST00000371601 KRT32Q14532 448 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 OLFML2BQ68BL8 750 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 STAG2Q8N3U4 1231 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 MAML3Q96JK9 1138 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 TMEM87BQ96K49 555 aa23.95■■□□□ 1.42
NPDC1-202ENST00000371601 CCDC69A6NI79 296 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 TAL1P17542 331 aaPredicted RBP23.94■■□□□ 1.42
NPDC1-202ENST00000371601 CCND3P30281 292 aaPredicted RBP23.94■■□□□ 1.42
NPDC1-202ENST00000371601 ZNF792Q3KQV3 632 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 MAP3K21Q5TCX8 1036 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 LY9Q9HBG7 655 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 ADCK5Q3MIX3 580 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 TSGA10IPQ3SY00 556 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 MUM1L1Q5H9M0 696 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 PRAMEF19Q5SWL8 479 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 PAK6Q9NQU5 681 aaPredicted RBP23.94■■□□□ 1.42
NPDC1-202ENST00000371601 MAD2L2Q9UI95 211 aa23.94■■□□□ 1.42
NPDC1-202ENST00000371601 DIS3Q9Y2L1 958 aaKnown RBP23.94■■□□□ 1.42
NPDC1-202ENST00000371601 USH1GQ495M9 461 aa23.93■■□□□ 1.42
NPDC1-202ENST00000371601 NSMFQ6X4W1 530 aa23.93■■□□□ 1.42
NPDC1-202ENST00000371601 MTA3Q9BTC8 594 aa23.93■■□□□ 1.42
NPDC1-202ENST00000371601 PNMA2Q9UL42 364 aa23.93■■□□□ 1.42
NPDC1-202ENST00000371601 A0A0G2JMZ2 1700 aa23.92■■□□□ 1.42
NPDC1-202ENST00000371601 POTEB2H3BUK9 544 aa23.92■■□□□ 1.42
NPDC1-202ENST00000371601 SH2B2O14492 632 aaPredicted RBP23.92■■□□□ 1.42
NPDC1-202ENST00000371601 HSPA4P34932 840 aa23.92■■□□□ 1.42
NPDC1-202ENST00000371601 DHX32Q7L7V1 743 aaKnown RBP23.92■■□□□ 1.42
NPDC1-202ENST00000371601 TINF2Q9BSI4 451 aa23.92■■□□□ 1.42
NPDC1-202ENST00000371601 MYL10Q9BUA6 226 aa23.92■■□□□ 1.42
NPDC1-202ENST00000371601 PLXNB2O15031 1838 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 COL11A1P12107 1806 aaPredicted RBP23.91■■□□□ 1.42
NPDC1-202ENST00000371601 MKI67P46013 3256 aaKnown RBP23.91■■□□□ 1.42
NPDC1-202ENST00000371601 PALM3A6NDB9 673 aaPredicted RBP23.91■■□□□ 1.42
NPDC1-202ENST00000371601 TROAPQ12815 778 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 GRM4Q14833 912 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 CDC37Q16543 378 aaPredicted RBP23.91■■□□□ 1.42
NPDC1-202ENST00000371601 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 TCEANC2Q96MN5 208 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 JMJD4Q9H9V9 463 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 A1CFQ9NQ94 594 aaKnown RBP23.91■■□□□ 1.42
NPDC1-202ENST00000371601 PARP14Q460N5 1801 aa23.91■■□□□ 1.42
NPDC1-202ENST00000371601 DNAJC25-GNG10A0A024R161 153 aa23.9■■□□□ 1.42
NPDC1-202ENST00000371601 HMGB1P09429 215 aaKnown RBP23.9■■□□□ 1.42
NPDC1-202ENST00000371601 FGD1P98174 961 aa23.9■■□□□ 1.42
NPDC1-202ENST00000371601 JAKMIP1Q96N16 626 aaKnown RBP23.9■■□□□ 1.42
NPDC1-202ENST00000371601 SNX14Q9Y5W7 946 aa23.9■■□□□ 1.42
NPDC1-202ENST00000371601 SLC12A7Q9Y666 1083 aa23.9■■□□□ 1.42
NPDC1-202ENST00000371601 LIFRP42702 1097 aa23.89■■□□□ 1.42
NPDC1-202ENST00000371601 EXOSC10Q01780 885 aaKnown RBP23.89■■□□□ 1.42
NPDC1-202ENST00000371601 CNTN2Q02246 1040 aa23.89■■□□□ 1.42
NPDC1-202ENST00000371601 SYNE3Q6ZMZ3 975 aa23.89■■□□□ 1.42
NPDC1-202ENST00000371601 CTCFLQ8NI51 663 aaPredicted RBP23.89■■□□□ 1.42
NPDC1-202ENST00000371601 USP26Q9BXU7 913 aa23.89■■□□□ 1.42
NPDC1-202ENST00000371601 PTPDC1A2A3K4 754 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 QRICH1Q2TAL8 776 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 FBXO11Q86XK2 927 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 TRPV1Q8NER1 839 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 KCNB2Q92953 911 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 SHISA4Q96DD7 197 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 CYP39A1Q9NYL5 469 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 PFASO15067 1338 aa23.88■■□□□ 1.41
NPDC1-202ENST00000371601 NFIBO00712 420 aa23.87■■□□□ 1.41
NPDC1-202ENST00000371601 DDAH1O94760 285 aa23.87■■□□□ 1.41
NPDC1-202ENST00000371601 CPA1P15085 419 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms