RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 RNF41Q9H4P4 317 aaPredicted RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 ZNF658Q5TYW1 1059 aaPredicted RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.03
PRKN-205ENST00000366897 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
PRKN-205ENST00000366897 TRIM47Q96LD4 638 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 SELENOOQ9BVL4 669 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 EHD2Q9NZN4 543 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 MYO1AQ9UBC5 1043 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 NID2Q14112 1375 aa15.24■□□□□ 0.03
PRKN-205ENST00000366897 STAT6P42226 847 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 MAGEA9P43362 315 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 EIF5P55010 431 aaKnown RBP15.23■□□□□ 0.03
PRKN-205ENST00000366897 PPARDQ03181 441 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 COG1Q8WTW3 980 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 CRACR2AQ9BSW2 395 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 BRMS1Q9HCU9 246 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 MYH6P13533 1939 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 CHD4Q14839 1912 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 AGPSO00116 658 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 PSMD14O00487 310 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 PRPF3O43395 683 aaKnown RBP15.23■□□□□ 0.03
PRKN-205ENST00000366897 PLEKP08567 350 aaPredicted RBP15.23■□□□□ 0.03
PRKN-205ENST00000366897 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 SPAG1Q07617 926 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 TROAPQ12815 778 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 HAUS4Q9H6D7 363 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 MYH2Q9UKX2 1941 aa15.23■□□□□ 0.03
PRKN-205ENST00000366897 RPS6KA5O75582 802 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 IDEP14735 1019 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
PRKN-205ENST00000366897 CXCR5P32302 372 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 GYG1P46976 350 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 CCT5P48643 541 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
PRKN-205ENST00000366897 CORO7P57737 925 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 MKRN1Q9UHC7 482 aaKnown RBP15.22■□□□□ 0.03
PRKN-205ENST00000366897 FAM205AQ6ZU69 1335 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 TNS1Q9HBL0 1735 aaKnown RBP15.22■□□□□ 0.03
PRKN-205ENST00000366897 MAGEB6P1A0A0J9YX57 407 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 PPFIA4O75335 1185 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 CT47A1Q5JQC4 288 aaPredicted RBP15.22■□□□□ 0.03
PRKN-205ENST00000366897 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRKN-205ENST00000366897 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
PRKN-205ENST00000366897 MROH5Q6ZUA9 1318 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 GNAT2P19087 354 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 TRIM14Q14142 442 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
PRKN-205ENST00000366897 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 DZIP3Q86Y13 1208 aaKnown RBP15.21■□□□□ 0.03
PRKN-205ENST00000366897 HPS3Q969F9 1004 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 DMGDHQ9UI17 866 aaKnown RBP15.21■□□□□ 0.03
PRKN-205ENST00000366897 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 CNTNAP5Q8WYK1 1306 aa15.21■□□□□ 0.03
PRKN-205ENST00000366897 AARSP49588 968 aaKnown RBP eCLIP15.21■□□□□ 0.02
PRKN-205ENST00000366897 LIG3P49916 1009 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 MICALL1Q8N3F8 863 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 MSL3Q8N5Y2 521 aaKnown RBP15.21■□□□□ 0.02
PRKN-205ENST00000366897 LRRC15Q8TF66 581 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 DNAJC7Q99615 494 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 MLXIPQ9HAP2 919 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 BCL9O00512 1426 aa15.21■□□□□ 0.02
PRKN-205ENST00000366897 RASSF10A6NK89 507 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 KCNQ2O43526 872 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 NAALADL2Q58DX5 795 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 PAPD7Q5XG87 772 aaKnown RBP15.2■□□□□ 0.02
PRKN-205ENST00000366897 ADSSL1Q8N142 457 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 ACSBG1Q96GR2 724 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 NHEJ1Q9H9Q4 299 aaPredicted RBP15.2■□□□□ 0.02
PRKN-205ENST00000366897 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 USP17L12C9JPN9 530 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 USP17L21D6R901 530 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 DNA2P51530 1060 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 GTF2A1P52655 376 aaPredicted RBP15.2■□□□□ 0.02
PRKN-205ENST00000366897 TUBB4BP68371 445 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 CCNI2Q6ZMN8 369 aaPredicted RBP15.2■□□□□ 0.02
PRKN-205ENST00000366897 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 EFCC1Q9HA90 598 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 JRKLQ9Y4A0 524 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 CAPN6Q9Y6Q1 641 aa15.2■□□□□ 0.02
PRKN-205ENST00000366897 GOLGA6CA6NDK9 693 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 GOLGA6BA6NDN3 693 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 ZNF263O14978 683 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 GOLGA6DP0CG33 693 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 CYP2D6P10635 497 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 KCTD19Q17RG1 926 aaPredicted RBP15.19■□□□□ 0.02
PRKN-205ENST00000366897 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 TUBGCP2Q9BSJ2 902 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 GOLGA6AQ9NYA3 693 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 CAPN11Q9UMQ6 739 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
PRKN-205ENST00000366897 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms