RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 ZNF792Q3KQV3 632 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 MFSD14CQ5VZR4 134 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 CHST3Q7LGC8 479 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 U2AF1L4Q8WU68 220 aaKnown RBP19.81■□□□□ 0.76
CKLF-204ENST00000362093 SHISA4Q96DD7 197 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.81■□□□□ 0.76
CKLF-204ENST00000362093 FBXO40Q9UH90 709 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 BRCA2P51587 3418 aa19.81■□□□□ 0.76
CKLF-204ENST00000362093 DNAJC25-GNG10A0A024R161 153 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 PGK2P07205 417 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 GOLGA8HP0CJ92 632 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 CAPN2P17655 700 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 TKFCQ3LXA3 575 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 CCDC174Q6PII3 467 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 MAML3Q96JK9 1138 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 DEFB118Q96PH6 123 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 SENP2Q9HC62 589 aa19.8■□□□□ 0.76
CKLF-204ENST00000362093 ZNFX1Q9P2E3 1918 aaKnown RBP19.8■□□□□ 0.76
CKLF-204ENST00000362093 ICAM1P05362 532 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 CYP2C19P33261 490 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 ASPRV1Q53RT3 343 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 RNF20Q5VTR2 975 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 MTA3Q9BTC8 594 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 UBA5Q9GZZ9 404 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 CRISPLD2Q9H0B8 497 aa19.79■□□□□ 0.76
CKLF-204ENST00000362093 ERICH2A1L162 156 aa19.78■□□□□ 0.76
CKLF-204ENST00000362093 PARP1P09874 1014 aaKnown RBP19.78■□□□□ 0.76
CKLF-204ENST00000362093 CCND3P30281 292 aaPredicted RBP19.78■□□□□ 0.76
CKLF-204ENST00000362093 COL9A3Q14050 684 aaPredicted RBP19.78■□□□□ 0.76
CKLF-204ENST00000362093 WTAPQ15007 396 aa19.78■□□□□ 0.76
CKLF-204ENST00000362093 SART3Q15020 963 aaKnown RBP19.78■□□□□ 0.76
CKLF-204ENST00000362093 TRERF1Q96PN7 1200 aa19.78■□□□□ 0.76
CKLF-204ENST00000362093 RNF146Q9NTX7 359 aa19.78■□□□□ 0.76
CKLF-204ENST00000362093 ALAS1P13196 640 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 MCM5P33992 734 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 TMEM67Q5HYA8 995 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 RASEFQ8IZ41 740 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 TRPV1Q8NER1 839 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 DDX11Q96FC9 970 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 CPVLQ9H3G5 476 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 ACAD9Q9H845 621 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 HOMER2Q9NSB8 354 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 CCPG1Q9ULG6 757 aa19.77■□□□□ 0.76
CKLF-204ENST00000362093 PRC1O43663 620 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 TFRCP02786 760 aaKnown RBP19.76■□□□□ 0.75
CKLF-204ENST00000362093 MUM1L1Q5H9M0 696 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 UBE2Q1Q7Z7E8 422 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 ADGRF4Q8IZF3 695 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 ANKRD35Q8N283 1001 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 STAG2Q8N3U4 1231 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 KCNB2Q92953 911 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 LY9Q9HBG7 655 aa19.76■□□□□ 0.75
CKLF-204ENST00000362093 PALM3A6NDB9 673 aaPredicted RBP19.75■□□□□ 0.75
CKLF-204ENST00000362093 CYBAP13498 195 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 TROAPQ12815 778 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 LHX8Q68G74 356 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 ZNF467Q7Z7K2 595 aaPredicted RBP19.75■□□□□ 0.75
CKLF-204ENST00000362093 MSL3Q8N5Y2 521 aaKnown RBP19.75■□□□□ 0.75
CKLF-204ENST00000362093 TMEM87BQ96K49 555 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 TINF2Q9BSI4 451 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 A1CFQ9NQ94 594 aaKnown RBP19.75■□□□□ 0.75
CKLF-204ENST00000362093 GPHNQ9NQX3 736 aaPredicted RBP19.75■□□□□ 0.75
CKLF-204ENST00000362093 MAD2L2Q9UI95 211 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 PNMA2Q9UL42 364 aa19.75■□□□□ 0.75
CKLF-204ENST00000362093 TAL1P17542 331 aaPredicted RBP19.74■□□□□ 0.75
CKLF-204ENST00000362093 GRM4Q14833 912 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 PRAMEF19Q5SWL8 479 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 MAMDC4Q6UXC1 1216 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 TMTC2Q8N394 836 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 FGD4Q96M96 766 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 NEK1Q96PY6 1258 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 OGDHLQ9ULD0 1010 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 WDR19Q8NEZ3 1342 aa19.74■□□□□ 0.75
CKLF-204ENST00000362093 KLRF2D3W0D1 207 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 SH2B2O14492 632 aaPredicted RBP19.73■□□□□ 0.75
CKLF-204ENST00000362093 REC8O95072 547 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 HSPA4P34932 840 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 LIFRP42702 1097 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 ADCK5Q3MIX3 580 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 FAM133AQ8N9E0 248 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 CLEC4DQ8WXI8 215 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 MTMR8Q96EF0 704 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 JMJD4Q9H9V9 463 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 NRBP1Q9UHY1 535 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 SMCHD1A6NHR9 2005 aa19.73■□□□□ 0.75
CKLF-204ENST00000362093 EPB41L2O43491 1005 aaKnown RBP19.72■□□□□ 0.75
CKLF-204ENST00000362093 EXOSC10Q01780 885 aaKnown RBP19.72■□□□□ 0.75
CKLF-204ENST00000362093 CDC37Q16543 378 aaPredicted RBP19.72■□□□□ 0.75
CKLF-204ENST00000362093 CATIPQ7Z7H3 387 aa19.72■□□□□ 0.75
CKLF-204ENST00000362093 MAP3K14Q99558 947 aa19.72■□□□□ 0.75
CKLF-204ENST00000362093 VAT1LQ9HCJ6 419 aa19.72■□□□□ 0.75
CKLF-204ENST00000362093 CYP39A1Q9NYL5 469 aa19.72■□□□□ 0.75
CKLF-204ENST00000362093 DDX20Q9UHI6 824 aaKnown RBP19.72■□□□□ 0.75
CKLF-204ENST00000362093 PFASO15067 1338 aa19.72■□□□□ 0.75
CKLF-204ENST00000362093 MKI67P46013 3256 aaKnown RBP19.71■□□□□ 0.75
CKLF-204ENST00000362093 SNAI1O95863 264 aaPredicted RBP19.71■□□□□ 0.75
CKLF-204ENST00000362093 CNGA1P29973 690 aa19.71■□□□□ 0.75
CKLF-204ENST00000362093 MNX1P50219 401 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms