RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 FLT1P17948 1338 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 CCT6AP40227 531 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 KCNJ12Q14500 433 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 SLC44A5Q8NCS7 719 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 VAT1LQ9HCJ6 419 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 INTS13Q9NVM9 706 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 LIMA1Q9UHB6 759 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 V9GYY5 206 aaPredicted RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 EEF1GP26641 437 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 COPB1P53618 953 aaKnown RBP10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 TUBB4BP68371 445 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 ZMYND12Q9H0C1 365 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 SWAP70Q9UH65 585 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 BTAF1O14981 1849 aa10.47□□□□□ -0.73
GTF3C2-202ENST00000359541 IRS2Q9Y4H2 1338 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 MFAP3LO75121 409 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 CASP1P29466 404 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 GOLGA8FQ08AF8 430 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 GOLGA8DPQ0D2H9 430 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 CRY2Q49AN0 593 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 CYP26C1Q6V0L0 522 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 COA1Q9GZY4 146 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 COL4A1P02462 1669 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 FGFR1OPO95684 399 aaKnown RBP10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 HOXA7P31268 230 aaPredicted RBP10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 UBXN1Q04323 297 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 RBL2Q08999 1139 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 TMCO3Q6UWJ1 677 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 SEPT12Q8IYM1 358 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 VPS16Q9H269 839 aa10.46□□□□□ -0.73
GTF3C2-202ENST00000359541 PPEF1O14829 653 aaPredicted RBP10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 ASIC1P78348 528 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 EVX2Q03828 476 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 PICALMQ13492 652 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 BMS1Q14692 1282 aaKnown RBP10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 KRT31Q15323 416 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 KRT222Q8N1A0 295 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 NAP1L4Q99733 375 aaKnown RBP10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 DLEC1Q9Y238 1755 aa10.46□□□□□ -0.74
GTF3C2-202ENST00000359541 TAF1P21675 1872 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 FAM205AQ6ZU69 1335 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 ADCY7P51828 1080 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 GTF2IP78347 998 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 TCP11X2Q5H9J9 407 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 CNNM4Q6P4Q7 775 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 DHTKD1Q96HY7 919 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 THAP9Q9H5L6 903 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 TAB2Q9NYJ8 693 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 GYS1P13807 737 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 GLT8D2Q9H1C3 349 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 WNT7AO00755 349 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 TEX33O43247 280 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 HOXA10P31260 410 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 CASP14P31944 242 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 FKBP15Q5T1M5 1219 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 SP8Q8IXZ3 490 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 CEP95Q96GE4 821 aa10.45□□□□□ -0.74
GTF3C2-202ENST00000359541 GAKO14976 1311 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 JAKMIP3Q5VZ66 844 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 IQCDQ96DY2 449 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 NUP58Q9BVL2 599 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 ALDH1B1P30837 517 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 PDE4DQ08499 809 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 ERCC6LQ2NKX8 1250 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 TOGARAM2Q6ZUX3 1019 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 SV2BQ7L1I2 683 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CEP112Q8N8E3 955 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CARD6Q9BX69 1037 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 AFF2P51816 1311 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CDC25AP30304 524 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 KRT9P35527 623 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CALCRLQ16602 461 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CCDC96Q2M329 555 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 KIF4BQ2VIQ3 1234 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 KMT5BQ4FZB7 885 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 TMEM139Q8IV31 216 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
GTF3C2-202ENST00000359541 CSGALNACT2Q8N6G5 542 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms