RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 GTPBP6O43824 516 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 RPN1P04843 607 aaKnown RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 TFAP4Q01664 338 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 LMBR1Q8WVP7 490 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 TMEM110-MUSTN1A8MSY1 372 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 HPDP32754 393 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 MAGEA1P43355 309 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 PPARDQ03181 441 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 ICA1Q05084 483 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 UBLCP1Q8WVY7 318 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 OSBPL5Q9H0X9 879 aaPredicted RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 USP17L12C9JPN9 530 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 USP17L21D6R901 530 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 H7C1W4 665 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 USP17L8P0C7I0 530 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 KCTD2Q14681 263 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 TSGA10IPQ3SY00 556 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 RESP18Q5W5W9 173 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 SMIM23A6NLE4 172 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ATP8B1O43520 1251 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 KCNQ2O43526 872 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 PRKAB2O43741 272 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 DNM2P50570 870 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ACRBPQ8NEB7 543 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 CCDC17Q96LX7 622 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 IFIH1Q9BYX4 1025 aaKnown RBP13.66□□□□□ -0.22
COLCA1-201ENST00000355430 RFX1P22670 979 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 DPP9Q86TI2 863 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 BPIFA3Q9BQP9 254 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
COLCA1-201ENST00000355430 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 NDUFAB1O14561 156 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 NONOQ15233 471 aaKnown RBP eCLIP13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
COLCA1-201ENST00000355430 HINFPQ9BQA5 517 aa13.66□□□□□ -0.22
COLCA1-201ENST00000355430 ENC1O14682 589 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 ANKRD35Q8N283 1001 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 GPKOWQ92917 476 aaPredicted RBP eCLIP13.65□□□□□ -0.22
COLCA1-201ENST00000355430 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
COLCA1-201ENST00000355430 EPN1Q9Y6I3 576 aaPredicted RBP13.65□□□□□ -0.22
COLCA1-201ENST00000355430 VWDEQ8N2E2 1590 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 CD163L1Q9NR16 1453 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 FLOT1O75955 427 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 IQCB1Q15051 598 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 BLIDQ8IZY5 108 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 ADCY7P51828 1080 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 FAM47CQ5HY64 1035 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.22
COLCA1-201ENST00000355430 USH1GQ495M9 461 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 GOLGA5Q8TBA6 731 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 SEC31BQ9NQW1 1179 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 RASAL2Q9UJF2 1139 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
COLCA1-201ENST00000355430 CFBP00751 764 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 CALRP27797 417 aaKnown RBP13.65□□□□□ -0.23
COLCA1-201ENST00000355430 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 GSDMAQ96QA5 445 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 UIMC1Q96RL1 719 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 TBC1D7Q9P0N9 293 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 LRWD1Q9UFC0 647 aa13.65□□□□□ -0.23
COLCA1-201ENST00000355430 ZNF609O15014 1411 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 SCG2P13521 617 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 ASIC2Q16515 512 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 BRIP1Q9BX63 1249 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
COLCA1-201ENST00000355430 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
COLCA1-201ENST00000355430 CYB5R4Q7L1T6 521 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 HS2ST1Q7LGA3 356 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 HACE1Q8IYU2 909 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
COLCA1-201ENST00000355430 ANKRD7Q92527 254 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms