RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 BRAPQ7Z569 592 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 FBXO11Q86XK2 927 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 GPKOWQ92917 476 aaPredicted RBP eCLIP16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 TCHHQ07283 1943 aa16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
NIPAL3-202ENST00000339255 GUCY1B3Q02153 619 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 DGKZQ13574 1117 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GADL1Q6ZQY3 521 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 HHIPL1Q96JK4 782 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 ZMYND12Q9H0C1 365 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GLT8D2Q9H1C3 349 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 FOXP1Q9H334 677 aaPredicted RBP16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 TMEM88BA6NKF7 163 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GNA11P29992 359 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GJA5P36382 358 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 NLRP5P59047 1200 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 DAGLBQ8NCG7 672 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 BICD2Q8TD16 824 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 SLC38A10Q9HBR0 1119 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 C6orf50Q9HD87 102 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 GJB4Q9NTQ9 266 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 PCDHA1Q9Y5I3 950 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
NIPAL3-202ENST00000339255 PPP1R11O60927 126 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 U2AF2P26368 475 aaKnown RBP eCLIP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 KIF23Q02241 960 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 OTUD7BQ6GQQ9 843 aa16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 DIS3L2Q8IYB7 885 aaKnown RBP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 TNPO1Q92973 898 aaKnown RBP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 ADAMTS5Q9UNA0 930 aa16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 SLC45A1Q9Y2W3 748 aa16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 CTDP1Q9Y5B0 961 aaPredicted RBP16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 SMCHD1A6NHR9 2005 aa16.71■□□□□ 0.27
NIPAL3-202ENST00000339255 VWA5AO00534 786 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 ZBED4O75132 1171 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 ICAM1P05362 532 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 KRT2P35908 639 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 ZNF157P51786 506 aaPredicted RBP16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 OAZ1P54368 228 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 IRX3P78415 501 aaPredicted RBP16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 RESTQ13127 1097 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 RGMBQ6NW40 437 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 CLEC17AQ6ZS10 378 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 MB21D1Q8N884 522 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 MS4A4AQ96JQ5 239 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 GBP4Q96PP9 640 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 PCDHA4Q9UN74 947 aa16.7■□□□□ 0.26
NIPAL3-202ENST00000339255 DSG3P32926 999 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 MOGSQ13724 837 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 FOXD4L5Q5VV16 416 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 LBX2Q6XYB7 198 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 RASAL3Q86YV0 1011 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 FOXD4L4Q8WXT5 416 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 SHISA4Q96DD7 197 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 ABCB11O95342 1321 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 ATP2A1O14983 1001 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 ADCY7P51828 1080 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 NPY5RQ15761 445 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 ATL3Q6DD88 541 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 CUL5Q93034 780 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 COA7Q96BR5 231 aa16.69■□□□□ 0.26
NIPAL3-202ENST00000339255 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 SMCO2A6NFE2 343 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 CCL15Q16663 113 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 MCTP2Q6DN12 878 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 REXO1Q8N1G1 1221 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 CCPG1Q9ULG6 757 aa16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 ABT1Q9ULW3 272 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 MRPL11Q9Y3B7 192 aaKnown RBP16.68■□□□□ 0.26
NIPAL3-202ENST00000339255 ZNF536O15090 1300 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 BTBD18B2RXH4 712 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 SLC10A3P09131 477 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 OSBPP22059 807 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 USH1GQ495M9 461 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 PSTPIP2Q9H939 334 aa16.67■□□□□ 0.26
NIPAL3-202ENST00000339255 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms